RNA–Protein interactions for RNA: ENST00000533209.5

SSBP3-214, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 4

Gene SSBP3, Length 552 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-214ENST00000533209 NKAIN2Q5VXU1 208 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF549Q6P9A3 640 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 ZNF449Q6P9G9 518 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CNSTQ6PJW8 725 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CCNI2Q6ZMN8 369 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 RBM44Q6ZP01 1051 aaKnown RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CAPN12Q6ZSI9 719 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 TMPRSS9Q7Z410 1059 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 PDZD3Q86UT5 571 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CCDC25Q86WR0 208 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 VRK3Q8IV63 474 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 RBM12BQ8IXT5 1001 aaKnown RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 GSDMBQ8TAX9 411 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 PANX3Q96QZ0 392 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 SLC38A3Q99624 504 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 TBC1D10AQ9BXI6 508 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 FAM129AQ9BZQ8 928 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 SYNDIG1Q9H7V2 258 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 LATS2Q9NRM7 1088 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 IMP3Q9NV31 184 aaKnown RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 GALPQ9UBC7 116 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 ANGPTL2Q9UKU9 493 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 ATXN7L1Q9ULK2 861 aaPredicted RBP11.71□□□□□ -0.53
SSBP3-214ENST00000533209 CLCA2Q9UQC9 943 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 NEUROG3Q9Y4Z2 214 aa11.71□□□□□ -0.53
SSBP3-214ENST00000533209 AKAP13Q12802 2813 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 IFRD1O00458 451 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 ZW10O43264 779 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 CSO75390 466 aaKnown RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 SLCO2B1O94956 709 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 AHSGP02765 367 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 ECHS1P30084 290 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 SSTR1P30872 391 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 CSF2RBP32927 897 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 MAGEA4P43358 317 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 CSE1LP55060 971 aaKnown RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 GPX6P59796 221 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 GPLD1P80108 840 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 FOXK2Q01167 660 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 MGAT5Q09328 741 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 HSPA14Q0VDF9 509 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 CAMK2BQ13554 666 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 GBX1Q14549 363 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 CLPPQ16740 277 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 ISXQ2M1V0 245 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 SYTL3Q4VX76 610 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 KIAA0408Q6ZU52 694 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 USP53Q70EK8 1073 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 B3GNT8Q7Z7M8 397 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 GALNT7Q86SF2 657 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 PALM2Q8IXS6 379 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 SLC22A15Q8IZD6 547 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 PHC3Q8NDX5 983 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 GABPB2Q8TAK5 448 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 ASZ1Q8WWH4 475 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 IFT81Q8WYA0 676 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 TFGQ92734 400 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 TMEM159Q96B96 161 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 C9orf72Q96LT7 481 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 DEPDC7Q96QD5 511 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 NUDT22Q9BRQ3 303 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 RDH14Q9HBH5 336 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 PPANQ9NQ55 473 aaKnown RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 OGFRQ9NZT2 677 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 MED16Q9Y2X0 877 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 MSRB2Q9Y3D2 182 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 HEBP2Q9Y5Z4 205 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 COL27A1Q8IZC6 1860 aaPredicted RBP11.7□□□□□ -0.54
SSBP3-214ENST00000533209 KNTC1P50748 2209 aa11.7□□□□□ -0.54
SSBP3-214ENST00000533209 PIKFYVEQ9Y2I7 2098 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 KPNA5O15131 536 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 UBXN7O94888 489 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 CPNE6O95741 557 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 C1QAP02745 245 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 APOA4P06727 396 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 GSTA2P09210 222 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 RHOXF2BP0C7M4 288 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 CHRM3P20309 590 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 CLCN7P51798 805 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 TIAL1Q01085 375 aaKnown RBP eCLIP11.69□□□□□ -0.54
SSBP3-214ENST00000533209 ZFP36L1Q07352 338 aaKnown RBP11.69□□□□□ -0.54
SSBP3-214ENST00000533209 TMED2Q15363 201 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 DNTTIP2Q5QJE6 756 aaKnown RBP11.69□□□□□ -0.54
SSBP3-214ENST00000533209 PLEKHS1Q5SXH7 462 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 ZNF574Q6ZN55 896 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-214ENST00000533209 CYS1Q717R9 158 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 OTOAQ7RTW8 1153 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 PIM3Q86V86 326 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 SLITRK4Q8IW52 837 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 OR10G6Q8NH81 332 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 ZFPM2Q8WW38 1151 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 JPH3Q8WXH2 748 aaPredicted RBP11.69□□□□□ -0.54
SSBP3-214ENST00000533209 FAM136AQ96C01 138 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 SLC30A3Q99726 388 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 RHOXF2Q9BQY4 288 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 AARSD1Q9BTE6 412 aaKnown RBP11.69□□□□□ -0.54
SSBP3-214ENST00000533209 KIR3DX1Q9H7L2 352 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 MVB12BQ9H7P6 319 aa11.69□□□□□ -0.54
SSBP3-214ENST00000533209 SMYD2Q9NRG4 433 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms