RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 COLEC10Q9Y6Z7 277 aa15□□□□□ -0.01
CPSF1-210ENST00000532935 F8W8V4 182 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 IFRD1O00458 451 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 LIN7AO14910 233 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 TOX3O15405 576 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 CD3EAPO15446 510 aaKnown RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 MLNP12872 115 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 NDUFS1P28331 727 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 CD151P48509 253 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 CLN3Q13286 438 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 KRT33BQ14525 404 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 PPP1R7Q15435 360 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 BROXQ5VW32 411 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 ARMC3Q5W041 872 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 IRGCQ6NXR0 463 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 CES3Q6UWW8 571 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 LDB1Q86U70 411 aaPredicted RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 PDZD3Q86UT5 571 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 MPP5Q8N3R9 675 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 MCUQ8NE86 351 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 ELMO1Q92556 727 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 ZDHHC12Q96GR4 267 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 CAPZA3Q96KX2 299 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 DDA1Q9BW61 102 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 DDX47Q9H0S4 455 aaKnown RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 XAB2Q9HCS7 855 aaKnown RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 RALYQ9UKM9 306 aaKnown RBP14.99□□□□□ -0.01
CPSF1-210ENST00000532935 SAR1BQ9Y6B6 198 aa14.99□□□□□ -0.01
CPSF1-210ENST00000532935 CTAGE9A4FU28 777 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 OR5K3A6NET4 321 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 GOLGA8MH3BSY2 632 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 RASSF9O75901 435 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 VAPBO95292 243 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 LIPCP11150 499 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 ARNTP27540 789 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 CD82P27701 267 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 TTPAP49638 278 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 UCNP55089 124 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 RAB15P59190 212 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 PPP1CAP62136 330 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 MC2RQ01718 297 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 DCAF12Q5T6F0 453 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 CASC4Q6P4E1 433 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 FAM92BQ6ZTR7 304 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 PRSS42Q7Z5A4 293 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 ZFAND4Q86XD8 727 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 CREG2Q8IUH2 290 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 NAT8LQ8N9F0 302 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 ACVR1CQ8NER5 493 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 SERPINB12Q96P63 405 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 FERD3LQ96RJ6 166 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 ASPSCR1Q9BZE9 553 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 ZNF768Q9H5H4 540 aaKnown RBP14.98□□□□□ -0.01
CPSF1-210ENST00000532935 PRORYQ9H606 182 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 RRAGDQ9NQL2 400 aaPredicted RBP14.98□□□□□ -0.01
CPSF1-210ENST00000532935 SAMD15Q9P1V8 674 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 PCYOX1Q9UHG3 505 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 SSUH2Q9Y2M2 353 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 B3GALT1Q9Y5Z6 326 aa14.98□□□□□ -0.01
CPSF1-210ENST00000532935 ATMQ13315 3056 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 SLC5A10A0PJK1 596 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 SDR42E2A6NKP2 422 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 PRMT5O14744 637 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 KIF1CO43896 1103 aaKnown RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 TMPRSS3P57727 454 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 BOP1Q14137 746 aaKnown RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 BRD3Q15059 726 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 TGIF1Q15583 401 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 SYTL3Q4VX76 610 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 RNASEH2BQ5TBB1 312 aaKnown RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 CACHD1Q5VU97 1274 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 ANKS6Q68DC2 871 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 KIAA0930Q6ICG6 404 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 NAPRTQ6XQN6 538 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 OOSP2Q86WS3 158 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 PPIL6Q8IXY8 311 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 OTUD6BQ8N6M0 293 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 TFGQ92734 400 aaPredicted RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 SLCO2A1Q92959 643 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 TSSK1BQ9BXA7 367 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 MVB12BQ9H7P6 319 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 FBXO8Q9NRD0 319 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 HRASLS2Q9NWW9 162 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 SIDT1Q9NXL6 827 aaKnown RBP14.97□□□□□ -0.01
CPSF1-210ENST00000532935 ASIC3Q9UHC3 531 aa14.97□□□□□ -0.01
CPSF1-210ENST00000532935 MAGEB16A2A368 324 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 OR6C74A6NCV1 312 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 GOLGA8KD6RF30 607 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 STMND1H3BQB6 276 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 GOLGA8TH3BQL2 631 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 KIF2AO00139 706 aaPredicted RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 FANCGO15287 622 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 NDUFS3O75489 264 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 ITGB6P18564 788 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 PAMP19021 973 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 PTGIRP43119 386 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 MAGEA3P43357 314 aa14.96□□□□□ -0.01
CPSF1-210ENST00000532935 ARCN1P48444 511 aaKnown RBP14.96□□□□□ -0.01
CPSF1-210ENST00000532935 SEPHS1P49903 392 aa14.96□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms