RNA–Protein interactions for RNA: ENST00000532725.1

CPSF1-209, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 597 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-209ENST00000532725 TTC4O95801 387 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 THRAP10827 490 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 TYRP1P17643 537 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 ITGB6P18564 788 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 AOAHP28039 575 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 ELK3P41970 407 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 MAPK9P45984 424 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 ARL4CP56559 192 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 EIF3IQ13347 325 aaKnown RBP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 CTBP1Q13363 440 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 TRA2AQ13595 282 aaKnown RBP eCLIP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 CRYMQ14894 314 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 HIF1AQ16665 826 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 ZNF789Q5FWF6 425 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 C3orf38Q5JPI3 329 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 CTSL3PQ5NE16 218 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 PHF19Q5T6S3 580 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 RNF187Q5TA31 235 aaPredicted RBP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 PTRHD1Q6GMV3 140 aaKnown RBP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 DUS1LQ6P1R4 473 aaKnown RBP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 IGF2-ASQ6U949 168 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 RAB11FIP2Q7L804 512 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 WDFY3Q8IZQ1 3526 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 LSMEM2Q8N112 164 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 KRT222Q8N1A0 295 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 SERBP1Q8NC51 408 aaKnown RBP eCLIP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 PHC3Q8NDX5 983 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 TFGQ92734 400 aaPredicted RBP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 LRRC39Q96DD0 335 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 CCDC74BQ96LY2 380 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 SLC46A1Q96NT5 459 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 WDR83Q9BRX9 315 aaKnown RBP19.38■□□□□ 0.69
CPSF1-209ENST00000532725 GNPTGQ9UJJ9 305 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 CDYLQ9Y232 598 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 CRYL1Q9Y2S2 319 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 HEBP2Q9Y5Z4 205 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 TEX264Q9Y6I9 313 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 EPG5Q9HCE0 2579 aa19.38■□□□□ 0.69
CPSF1-209ENST00000532725 ACACAQ13085 2346 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 UBA6A0AVT1 1052 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-209ENST00000532725 E7ESA3 106 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 IFRD1O00458 451 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-209ENST00000532725 NDC80O14777 642 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 PFDN6O15212 129 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 BRINP1O60477 761 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 AMD1P17707 334 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 NDUFS1P28331 727 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 FMO4P31512 558 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 EIF3BP55884 814 aaKnown RBP19.37■□□□□ 0.69
CPSF1-209ENST00000532725 TUBB2AQ13885 445 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 C16orf72Q14CZ0 275 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 HSP90AA5PQ58FG0 334 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 SPANXN3Q5MJ09 141 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 HP1BP3Q5SSJ5 553 aaPredicted RBP19.37■□□□□ 0.69
CPSF1-209ENST00000532725 ARHGAP22Q7Z5H3 698 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 PDZD3Q86UT5 571 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 DENND6AQ8IWF6 608 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 LMNTD2Q8IXW0 634 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 FBXO39Q8N4B4 442 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 RCBTB1Q8NDN9 531 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 ASZ1Q8WWH4 475 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 ZCCHC14Q8WYQ9 949 aaKnown RBP19.37■□□□□ 0.69
CPSF1-209ENST00000532725 TMEM159Q96B96 161 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 FERD3LQ96RJ6 166 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 TUBB2BQ9BVA1 445 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 TSSK1BQ9BXA7 367 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 DPH5Q9H2P9 285 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 KIR3DX1Q9H7L2 352 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 INTS10Q9NVR2 710 aaKnown RBP19.37■□□□□ 0.69
CPSF1-209ENST00000532725 GRHL1Q9NZI5 618 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 SLC24A2Q9UI40 661 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 MRFAP1Q9Y605 127 aa19.37■□□□□ 0.69
CPSF1-209ENST00000532725 PLD2O14939 933 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 HGSO14964 777 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 SLCO2B1O94956 709 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 C9P02748 559 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 ESR1P03372 595 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 PPM1FP49593 454 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 HSPA14Q0VDF9 509 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 BOP1Q14137 746 aaKnown RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 ZNF470Q6ECI4 717 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 UNC5AQ6ZN44 842 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 PROSER1Q86XN7 944 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 PLXDC1Q8IUK5 500 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 VRK3Q8IV63 474 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 CALML6Q8TD86 181 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 JPH3Q8WXH2 748 aaPredicted RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 RSC1A1Q92681 617 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 PANX3Q96QZ0 392 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 CMKLR1Q99788 373 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 RAB33BQ9H082 229 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 MVB12BQ9H7P6 319 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 ASCL3Q9NQ33 180 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 EPHA6Q9UF33 1036 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 ZC3H7BQ9UGR2 993 aaKnown RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 VPS9D1Q9Y2B5 631 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 UTP11Q9Y3A2 253 aaKnown RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 LOXL2Q9Y4K0 774 aa19.36■□□□□ 0.69
CPSF1-209ENST00000532725 URB1O60287 2271 aaKnown RBP19.36■□□□□ 0.69
CPSF1-209ENST00000532725 MN1Q10571 1320 aaPredicted RBP19.35■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms