RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 NEU2Q9Y3R4 380 aa22.42■■□□□ 1.18
CAPN1-222ENST00000532285 PCDHB11Q9Y5F2 797 aa22.42■■□□□ 1.18
CAPN1-222ENST00000532285 B3GALT1Q9Y5Z6 326 aa22.42■■□□□ 1.18
CAPN1-222ENST00000532285 IQCJ-SCHIP1C9J366 451 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-222ENST00000532285 STMND1H3BQB6 276 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 OR1I1O60431 355 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 TERF1P54274 439 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 CACHD1Q5VU97 1274 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 CEACAM20Q6UY09 585 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 PRSS42Q7Z5A4 293 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 JPH3Q8WXH2 748 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-222ENST00000532285 PMEPA1Q969W9 287 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 CCNL2Q96S94 520 aaPredicted RBP22.41■■□□□ 1.18
CAPN1-222ENST00000532285 ZPBPQ9BS86 351 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 ZNF768Q9H5H4 540 aaKnown RBP22.41■■□□□ 1.18
CAPN1-222ENST00000532285 CPNE5Q9HCH3 593 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 SYBUQ9NX95 663 aa22.41■■□□□ 1.18
CAPN1-222ENST00000532285 CD3EAPO15446 510 aaKnown RBP22.4■■□□□ 1.18
CAPN1-222ENST00000532285 NMBRP28336 390 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 PDHA2P29803 388 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 PREPP48147 710 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 TTPAP49638 278 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 GNG11P61952 73 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 SEMA3AQ14563 771 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 TGIF1Q15583 401 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 ANKS6Q68DC2 871 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 FAM92BQ6ZTR7 304 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 GPR155Q7Z3F1 870 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 DTX1Q86Y01 620 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 MCUQ8NE86 351 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 ACVR1CQ8NER5 493 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 CPT1BQ92523 772 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 ELMO1Q92556 727 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 FERD3LQ96RJ6 166 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 WDR70Q9NW82 654 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 SOX13Q9UN79 622 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 IGSF10Q6WRI0 2623 aa22.4■■□□□ 1.18
CAPN1-222ENST00000532285 OR5K3A6NET4 321 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 MLNP12872 115 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 SEPHS1P49903 392 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 PLOD1Q02809 727 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-222ENST00000532285 VAC14Q08AM6 782 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 ANKRD22Q5VYY1 191 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 CCDC81Q6ZN84 652 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 CAND1Q86VP6 1230 aaKnown RBP22.39■■□□□ 1.17
CAPN1-222ENST00000532285 OOSP2Q86WS3 158 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 MPP5Q8N3R9 675 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 KLHL6Q8WZ60 621 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 TFGQ92734 400 aaPredicted RBP22.39■■□□□ 1.17
CAPN1-222ENST00000532285 TSSK1BQ9BXA7 367 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 MVB12BQ9H7P6 319 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 HRASLS2Q9NWW9 162 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 SEMA5BQ9P283 1151 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 PYCARDQ9ULZ3 195 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 MGAQ8IWI9 3026 aa22.39■■□□□ 1.17
CAPN1-222ENST00000532285 LOC400499M0QZD8 3231 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 POLR1CO15160 346 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-222ENST00000532285 KIF1CO43896 1103 aaKnown RBP22.38■■□□□ 1.17
CAPN1-222ENST00000532285 AVILO75366 819 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 ARHGAP40Q5TG30 622 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 ARMC6Q6NXE6 501 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 SNRNP27Q8WVK2 155 aaKnown RBP22.38■■□□□ 1.17
CAPN1-222ENST00000532285 UBXN4Q92575 508 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 MFSD3Q96ES6 412 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 CD180Q99467 661 aa22.38■■□□□ 1.17
CAPN1-222ENST00000532285 XAB2Q9HCS7 855 aaKnown RBP22.38■■□□□ 1.17
CAPN1-222ENST00000532285 SIDT1Q9NXL6 827 aaKnown RBP22.38■■□□□ 1.17
CAPN1-222ENST00000532285 MARCH4Q9P2E8 410 aaPredicted RBP22.38■■□□□ 1.17
CAPN1-222ENST00000532285 TEX51A0A1B0GUA7 166 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 SLC5A10A0PJK1 596 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 OR6C74A6NCV1 312 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 VAPBO95292 243 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 PPP1CAP62136 330 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 BRD3Q15059 726 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 SYTL3Q4VX76 610 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 PAPD7Q5XG87 772 aaKnown RBP22.37■■□□□ 1.17
CAPN1-222ENST00000532285 LDB1Q86U70 411 aaPredicted RBP22.37■■□□□ 1.17
CAPN1-222ENST00000532285 PHC3Q8NDX5 983 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 OR4E2Q8NGC2 313 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 LCN9Q8WX39 176 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 CTRCQ99895 268 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 CARD6Q9BX69 1037 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 SAMD15Q9P1V8 674 aa22.37■■□□□ 1.17
CAPN1-222ENST00000532285 MAGEB16A2A368 324 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 SDR42E2A6NKP2 422 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 K7ENP7 123 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 PRMT5O14744 637 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-222ENST00000532285 TMEM63AO94886 807 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 NELFEP18615 380 aaKnown RBP22.36■■□□□ 1.17
CAPN1-222ENST00000532285 ATP1A2P50993 1020 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 FOXM1Q08050 763 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 BOP1Q14137 746 aaKnown RBP22.36■■□□□ 1.17
CAPN1-222ENST00000532285 PPP1R7Q15435 360 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 DNTTIP2Q5QJE6 756 aaKnown RBP22.36■■□□□ 1.17
CAPN1-222ENST00000532285 MANEAQ5SRI9 462 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 MRNIPQ6NTE8 343 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 CASC4Q6P4E1 433 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 INO80CQ6PI98 192 aaPredicted RBP22.36■■□□□ 1.17
CAPN1-222ENST00000532285 CES3Q6UWW8 571 aa22.36■■□□□ 1.17
CAPN1-222ENST00000532285 NAPGQ99747 312 aaPredicted RBP22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms