RNA–Protein interactions for RNA: ENST00000531303.5

SMPD1-205, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 1,451 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-205ENST00000531303 NMRAL1Q9HBL8 299 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TRNAU1APQ9NX07 287 aaKnown RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ARHGEF17Q96PE2 2063 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TMEM120BA0PK00 339 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 NPEPPSL1A6NEC2 478 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TYROBPO43914 113 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CSF2P04141 144 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ENO3P13929 434 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TFEBP19484 476 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CLCNKAP51800 687 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 BNC1Q01954 994 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TCF15Q12870 199 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ILF3Q12906 894 aaKnown RBP eCLIP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 MPP2Q14168 576 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 GBX1Q14549 363 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 DUOXA1Q1HG43 343 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 METRNLQ641Q3 311 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 KLC3Q6P597 504 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 CYHR1Q6ZMK1 362 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TAF8Q7Z7C8 310 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 SLC22A15Q8IZD6 547 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 SPDYE1Q8NFV5 336 aaPredicted RBP18.65■□□□□ 0.58
SMPD1-205ENST00000531303 MGARPQ8TDB4 240 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 TCP10LQ8TDR4 215 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 GLMNQ92990 594 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 GPR78Q96P69 363 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 WWP1Q9H0M0 922 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ARRDC1-AS1Q9H2J1 176 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 SMOC1Q9H4F8 434 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 ALG9Q9H6U8 611 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 PRDM8Q9NQV8 689 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 SLC17A7Q9P2U7 560 aa18.65■□□□□ 0.58
SMPD1-205ENST00000531303 USP34Q70CQ2 3546 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 PDZK1P1A8MUH7 402 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 SDC3O75056 442 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 GSTA1P08263 222 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 NME1P15531 152 aaKnown RBP18.64■□□□□ 0.57
SMPD1-205ENST00000531303 IDSP22304 550 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 SLC26A3P40879 764 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 CTSKP43235 329 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 DMPKQ09013 629 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 LRP8Q14114 963 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 TSNQ15631 228 aaKnown RBP18.64■□□□□ 0.57
SMPD1-205ENST00000531303 TSNAXIP1Q2TAA8 658 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 LRRC8EQ6NSJ5 796 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 CCDC63Q8NA47 563 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 LMX1AQ8TE12 382 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 EXT2Q93063 718 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 PTERQ96BW5 349 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 FAM111AQ96PZ2 611 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 LRRC61Q9BV99 259 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 MLXIPLQ9NP71 852 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 SSU72Q9NP77 194 aaKnown RBP18.64■□□□□ 0.57
SMPD1-205ENST00000531303 CPSF2Q9P2I0 782 aaKnown RBP18.64■□□□□ 0.57
SMPD1-205ENST00000531303 GRID1Q9ULK0 1009 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 SMG5Q9UPR3 1016 aaKnown RBP18.64■□□□□ 0.57
SMPD1-205ENST00000531303 CFAP20Q9Y6A4 193 aaKnown RBP18.64■□□□□ 0.57
SMPD1-205ENST00000531303 RALGAPA1Q6GYQ0 2036 aa18.64■□□□□ 0.57
SMPD1-205ENST00000531303 CABIN1Q9Y6J0 2220 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 KLHL33A6NCF5 533 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 KCNJ13O60928 360 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 SLC35G4P0C7Q5 338 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 MPC1LP0DKB6 136 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 NR1D1P20393 614 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 OAS2P29728 719 aaKnown RBP18.63■□□□□ 0.57
SMPD1-205ENST00000531303 ATP6V0D1P61421 351 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 PPP2R2AP63151 447 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 PLOD1Q02809 727 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-205ENST00000531303 RPA4Q13156 261 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 OR4D1Q15615 310 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 TRIM61Q5EBN2 209 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 PEAR1Q5VY43 1037 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-205ENST00000531303 ISCA2Q86U28 154 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 NRROSQ86YC3 692 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 FSTL5Q8N475 847 aaPredicted RBP18.63■□□□□ 0.57
SMPD1-205ENST00000531303 CEP76Q8TAP6 659 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 MDM1Q8TC05 714 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 GPBAR1Q8TDU6 330 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 PDLIM5Q96HC4 596 aaKnown RBP18.63■□□□□ 0.57
SMPD1-205ENST00000531303 GSDMCQ9BYG8 508 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 OR52A5Q9H2C5 316 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 MKS1Q9NXB0 559 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 TBC1D29Q9UFV1 150 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 ADAMTS6Q9UKP5 1117 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 EMCNQ9ULC0 261 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 ACSL5Q9ULC5 683 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 WDR37Q9Y2I8 494 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 PLLPQ9Y342 182 aa18.63■□□□□ 0.57
SMPD1-205ENST00000531303 TRBV23OR9-2A0A075B6M9 112 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 DLL1O00548 723 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 PRPF4O43172 522 aaKnown RBP eCLIP18.62■□□□□ 0.57
SMPD1-205ENST00000531303 EPN2O95208 641 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 EML2O95834 649 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 HOXD12P35452 270 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 MPLP40238 635 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 DPP6P42658 865 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 IL9RQ01113 521 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 GRIK2Q13002 908 aa18.62■□□□□ 0.57
SMPD1-205ENST00000531303 ACAP2Q15057 778 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms