RNA–Protein interactions for RNA: ENST00000530253.5

CCDC90B-217, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 2

Gene CCDC90B, Length 776 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-217ENST00000530253 CTPS1P17812 591 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 NAT1P18440 290 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 HLA-DPA1P20036 260 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 MAKP20794 623 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 IVDP26440 423 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 HNF1BP35680 557 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 FDFT1P37268 417 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 POLR2LP62875 67 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 CKAP4Q07065 602 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 CCDC15Q0P6D6 951 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 ELP6Q0PNE2 266 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 PTK6Q13882 451 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 SIM2Q14190 667 aaPredicted RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 SPARCL1Q14515 664 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 KCNJ11Q14654 390 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TRIP13Q15645 432 aaPredicted RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 SLC1A5Q15758 541 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 SIRPB2Q5JXA9 342 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 CFAP58Q5T655 872 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 KIAA1161Q6NSJ0 714 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 ERAP2Q6P179 960 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 NEK5Q6P3R8 708 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 CRTC1Q6UUV9 634 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 USP45Q70EL2 814 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 GSTA5Q7RTV2 222 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 MAMDC2Q7Z304 686 aaPredicted RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 KDELC2Q7Z4H8 507 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TTC7BQ86TV6 843 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TTC30BQ8N4P2 665 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 DEFB119Q8N690 84 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 CELF2-AS1Q8N7Q2 184 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 KIF18AQ8NI77 898 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 IL17DQ8TAD2 202 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 GRK7Q8WTQ7 553 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 HNRNPLLQ8WVV9 542 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 NEU4Q8WWR8 484 aaPredicted RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 DNASE2BQ8WZ79 361 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 CPT1BQ92523 772 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 EID2BQ96D98 161 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 COQ10AQ96MF6 247 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 KRT12Q99456 494 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TBL1YQ9BQ87 522 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 APOL2Q9BQE5 337 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TRIM51Q9BSJ1 452 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 LRRC40Q9H9A6 602 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 ARNT2Q9HBZ2 717 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 EIF2B3Q9NR50 452 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 GALNT8Q9NY28 637 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 AAR2Q9Y312 384 aaKnown RBP8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 RALGAPA1Q6GYQ0 2036 aa8.71□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3DA0A087WVF3 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3IA0A087WXS9 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3EA0A087X179 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3KA0A087X1G2 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TCRBV7S3A2A0A539 114 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3FA6NER0 549 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 FAM47DPA6NHR8 397 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 ERI2A8K979 691 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3LB9A6J9 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 MATN2O00339 956 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 WNT9AO14904 365 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TP73O15350 636 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TTI1O43156 1089 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 EPN2O95208 641 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 GAS8O95995 478 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 FGF1P05230 155 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3HP0C7X1 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 PIRTP0C851 137 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TPSB2P20231 275 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 XPAP23025 273 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 GRIA1P42261 906 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 VPS41P49754 854 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 MEOX1P50221 254 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 STC1P52823 247 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 FAM193AP78312 1265 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 DGCR2P98153 550 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 DR1Q01658 176 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 CREB5Q02930 508 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 GPS1Q13098 491 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TUBB2AQ13885 445 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 DHX34Q14147 1143 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 PRPSAP1Q14558 356 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TPSAB1Q15661 275 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 SYCP2LQ5T4T6 812 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 ANKRD22Q5VYY1 191 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 LRRC66Q68CR7 880 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3GQ6DHY5 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3CQ6IPX1 549 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 C4orf22Q6V702 233 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 LPCAT2Q7L5N7 544 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 ADGRE4PQ86SQ3 457 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TBC1D3Q8IZP1 549 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 ZNF808Q8N4W9 903 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 ASB12Q8WXK4 309 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 ZNF669Q96BR6 464 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 RUNDC3BQ96NL0 473 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 KLF6Q99612 283 aaPredicted RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 WRAP53Q9BUR4 548 aaKnown RBP8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 TUBB2BQ9BVA1 445 aa8.7□□□□□ -1.02
CCDC90B-217ENST00000530253 FSD1LQ9BXM9 530 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms