RNA–Protein interactions for RNA: ENST00000529963.1

AMBRA1-209, Transcript of autophagy and beclin 1 regulator 1, humanhuman

TSL 1 (best)

Gene AMBRA1, Length 1,529 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1-209ENST00000529963 DHX58Q96C10 678 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZG16BQ96DA0 208 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 DAZAP1Q96EP5 407 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF396Q96N95 335 aaPredicted RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 XPO6Q96QU8 1125 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FBXO44Q9H4M3 255 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SMYD3Q9H7B4 428 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZDHHC4Q9NPG8 344 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SPHK2Q9NRA0 654 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TMEM30AQ9NV96 361 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 DNAJC17Q9NVM6 304 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 WDR35Q9P2L0 1181 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 CHORDC1Q9UHD1 332 aaPredicted RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 LSM7Q9UK45 103 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 PILRBQ9UKJ0 227 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 MTMR6Q9Y217 621 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 NME7Q9Y5B8 376 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 RAI2Q9Y5P3 530 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SHROOM3Q8TF72 1996 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 PTPRDP23468 1912 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 IGHV1OR15-9A0A0B4J2B8 117 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SPAARA0A1B0GVQ0 90 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FAM92AA1XBS5 289 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 CYSRT1A8MQ03 144 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 NEDD8-MDP1E9PL57 170 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 J3KRW8 73 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 J3QKU1 62 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 STX6O43752 255 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 CACNG3O60359 315 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 PPP6R2O75170 966 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 JTBO76095 146 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 YEATS4O95619 227 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TOP3BO95985 862 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZDHHC11BP0C7U3 371 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FAM200BP0CF97 657 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 PLA2G2AP14555 144 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF37AP17032 561 aaPredicted RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 GABRG2P18507 467 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 GALNSP34059 522 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 RAE1P78406 368 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ZNF33AQ06730 810 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SEMA3BQ13214 749 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 KCNJ12Q14500 433 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TIGD6Q17RP2 521 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FAM90A2PQ658T7 463 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 CCDC144NLQ6NUI1 221 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SCARA5Q6ZMJ2 495 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 RD3Q7Z3Z2 195 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 PIP4P1Q86T03 277 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TMEM25Q86YD3 366 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 BBS7Q8IWZ6 715 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 MINDY1Q8N5J2 469 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 PNPLA1Q8N8W4 532 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SCFD1Q8WVM8 642 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 KCNK16Q96T55 309 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 EIF3CQ99613 913 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 BBS2Q9BXC9 721 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 FAM124BQ9H5Z6 455 aaPredicted RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 ITM2CQ9NQX7 267 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 TLR8Q9NR97 1041 aaKnown RBP5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 IL37Q9NZH6 218 aa5.23□□□□□ -1.57
AMBRA1-209ENST00000529963 SPTAN1Q13813 2472 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 ITPR1Q14643 2758 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 PCNX2A6NKB5 2137 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 PI4KAP42356 2102 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 PTPN13Q12923 2485 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 MYO18AQ92614 2054 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 DMXL2Q8TDJ6 3036 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 PVALEFA0A1B0GWK0 134 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 A0A1W2PQF6 199 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 LRRIQ3A6PVS8 624 aaPredicted RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 M0QYT0 321 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 POLR2DO15514 142 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 MBPP02686 304 aaPredicted RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 RPN1P04843 607 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 PYGLP06737 847 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 ITGA5P08648 1049 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 TMIGD3P0DMS9 266 aaPredicted RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 CCDC130P13994 396 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 GNSP15586 552 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 ATP5C1P36542 298 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 CASP4P49662 377 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 NDST1P52848 882 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 CDH8P55286 799 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 MAP3K7CLP57077 242 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 TXNL4AP83876 142 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 CCDC15Q0P6D6 951 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 SLC14A1Q13336 389 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 DNASE1L3Q13609 305 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 MFSD13AQ14CX5 517 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 E2F5Q15329 346 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 KNOP1Q1ED39 458 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 SGSM1Q2NKQ1 1148 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 WDR45BQ5MNZ6 344 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 KIAA1324Q6UXG2 1013 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 TPGS1Q6ZTW0 290 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 PAQR9Q6ZVX9 377 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 RSRC2Q7L4I2 434 aaKnown RBP5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 TADA2BQ86TJ2 420 aa5.22□□□□□ -1.57
AMBRA1-209ENST00000529963 ACOT1Q86TX2 421 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms