RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 ZSCAN5AQ9BUG6 496 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 SPATA16Q9BXB7 569 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 GSDMCQ9BYG8 508 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 TRIM8Q9BZR9 551 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 DPEP2Q9H4A9 486 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 TRABDQ9H4I3 376 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 BPIFA1Q9NP55 256 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ARFGAP3Q9NP61 516 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 RAD18Q9NS91 495 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 KCND1Q9NSA2 647 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 FAM53CQ9NYF3 392 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 IL17CQ9P0M4 197 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 TAAR2Q9P1P5 351 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 VPS18Q9P253 973 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 ATXN10Q9UBB4 475 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 APPL1Q9UKG1 709 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 PRKAB1Q9Y478 270 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 RNF215Q9Y6U7 377 aa8.33□□□□□ -1.08
SSBP3-212ENST00000528930 GOLGA6L9A6NEM1 432 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 PRSS44E7EML9 344 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 B4GAT1O43505 415 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 NUAK1O60285 661 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ANXA9O76027 345 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 SLC25A14O95258 325 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-212ENST00000528930 METTL18O95568 372 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ECEL1O95672 775 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 SLC4A1P02730 911 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 CCDC175P0C221 793 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 GLB1P16278 677 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF8P17098 575 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ARSDP51689 593 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 GDF10P55107 478 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 CCL7P80098 99 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 B4GALNT1Q00973 533 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 TNP2Q05952 138 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ZRSR2Q15696 482 aaKnown RBP8.32□□□□□ -1.08
SSBP3-212ENST00000528930 INPP5JQ15735 1006 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ATP13A5Q4VNC0 1218 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 CRTC2Q53ET0 693 aaPredicted RBP8.32□□□□□ -1.08
SSBP3-212ENST00000528930 PDPK2PQ6A1A2 396 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 DENND5AQ6IQ26 1287 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 SLC30A9Q6PML9 568 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ADGRG6Q86SQ4 1221 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 PRIMA1Q86XR5 153 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 GALNT13Q8IUC8 556 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 BLOC1S5Q8TDH9 187 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ZDHHC1Q8WTX9 485 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 PATE1Q8WXA2 126 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF592Q92610 1267 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 GLYATL1Q969I3 302 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 TMEM74Q96NL1 305 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 PLEKHG4BQ96PX9 1271 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 FERMT1Q9BQL6 677 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 FICDQ9BVA6 458 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 FOXP3Q9BZS1 431 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 CARD9Q9H257 536 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 SEMA6CQ9H3T2 930 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 LRRN3Q9H3W5 708 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 RMI1Q9H9A7 625 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 TRIM39Q9HCM9 518 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 IL26Q9NPH9 171 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 HACD3Q9P035 362 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 LRIT1Q9P2V4 623 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 ZNHIT2Q9UHR6 403 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 AAR2Q9Y312 384 aaKnown RBP8.32□□□□□ -1.08
SSBP3-212ENST00000528930 KCNMB2Q9Y691 235 aa8.32□□□□□ -1.08
SSBP3-212ENST00000528930 A0A1W2PNR3 127 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 GAPDHSO14556 408 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 CHUKO15111 745 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 PPM1DO15297 605 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 GRID2O43424 1007 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 BUD23O43709 281 aaKnown RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 NUDT21O43809 227 aaKnown RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 PRICKLE3O43900 615 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 CBX6O95503 412 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 EML2O95834 649 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 PRKAR1AP10644 381 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 CAPN3P20807 821 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ACTR1BP42025 376 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 MAZP56270 477 aaKnown RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ACTR1AP61163 376 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 LRP8Q14114 963 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 PTPRCAPQ14761 206 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 NR1D2Q14995 579 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 OASLQ15646 514 aaKnown RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 PARP6Q2NL67 630 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 DEFB109BQ30KR1 87 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 KHDC1Q4VXA5 237 aaKnown RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ARSJQ5FYB0 599 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF569Q5MCW4 686 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 DNTTIP2Q5QJE6 756 aaKnown RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 SEL1L2Q5TEA6 688 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 KCTD11Q693B1 232 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 CHST15Q7LFX5 561 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 GLT6D1Q7Z4J2 308 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ZNF438Q7Z4V0 828 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 SPRED1Q7Z699 444 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 ZGRF1Q86YA3 2104 aa8.31□□□□□ -1.08
SSBP3-212ENST00000528930 SLC13A5Q86YT5 568 aaPredicted RBP8.31□□□□□ -1.08
SSBP3-212ENST00000528930 FAM71DQ8N9W8 422 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms