RNA–Protein interactions for RNA: ENST00000528086.5

CD44-227, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 580 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-227ENST00000528086 FOLR1P15328 257 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 VCLP18206 1134 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 MGAT1P26572 445 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 KPNA2P52292 529 aaKnown RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 SESN2P58004 480 aaPredicted RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 BOP1Q14137 746 aaKnown RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 ITIH4Q14624 930 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 SKIDA1Q1XH10 827 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 PPP1R21Q6ZMI0 780 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 RBM12BQ8IXT5 1001 aaKnown RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 DNAAF3Q8N9W5 541 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 LMNTD1Q8N9Z9 388 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 OR4L1Q8NH43 312 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 CPT1BQ92523 772 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 MFSD3Q96ES6 412 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 DCUN1D1Q96GG9 259 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 OSBPL9Q96SU4 736 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 KIFC1Q9BW19 673 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 SLC12A9Q9BXP2 914 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 STN1Q9H668 368 aaKnown RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 SYBUQ9NX95 663 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 TRMT1Q9NXH9 659 aaKnown RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 IL17BQ9UHF5 180 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 JRKLQ9Y4A0 524 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 PCDHGA4Q9Y5G9 962 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 PCSK5Q92824 1860 aa10.38□□□□□ -0.75
CD44-227ENST00000528086 TLN1Q9Y490 2541 aaKnown RBP10.38□□□□□ -0.75
CD44-227ENST00000528086 LOC101059948A0A1B0GTJ6 334 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 OR6C74A6NCV1 312 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 TOX3O15405 576 aaPredicted RBP10.37□□□□□ -0.75
CD44-227ENST00000528086 ZW10O43264 779 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 HCRTR1O43613 425 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 AP2A2O94973 939 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 LIFP15018 202 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 NELFEP18615 380 aaKnown RBP10.37□□□□□ -0.75
CD44-227ENST00000528086 TPSB2P20231 275 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 CD82P27701 267 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 CCR7P32248 378 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 COILP38432 576 aaPredicted RBP10.37□□□□□ -0.75
CD44-227ENST00000528086 HALP42357 657 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 MAGEA3P43357 314 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 VPS41P49754 854 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 TERF1P54274 439 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 UCNP55089 124 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 GRB7Q14451 532 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 TPSAB1Q15661 275 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 CACHD1Q5VU97 1274 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 IRGCQ6NXR0 463 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 LRRC8BQ6P9F7 803 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 CCDC81Q6ZN84 652 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 ADGRF3Q8IZF5 1079 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 UNC5BQ8IZJ1 945 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 CCDC89Q8N998 374 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 OR4E2Q8NGC2 313 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 OR5AR1Q8NGP9 310 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 HEXDCQ8WVB3 486 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 UBL7Q96S82 380 aaPredicted RBP10.37□□□□□ -0.75
CD44-227ENST00000528086 MENTQ9BUN1 341 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 P2RY12Q9H244 342 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 XKR8Q9H6D3 395 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 BAHCC1Q9P281 2608 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 ICKQ9UPZ9 632 aa10.37□□□□□ -0.75
CD44-227ENST00000528086 MED13Q9UHV7 2174 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 ZNF462Q96JM2 2506 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 KLHL33A6NCF5 533 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 GOLGA6L3A6NEY3 463 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 GOLGA8KD6RF30 607 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 E7EVH7 732 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 STMND1H3BQB6 276 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 GOLGA8TH3BQL2 631 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 BTN3A1O00481 513 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 RAD1O60671 282 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 GPC4O75487 556 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 STK17BO94768 372 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 KRT14P02533 472 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 SLC35G4P0C7Q5 338 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 EBLN1P0CF75 366 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 RALBP11234 206 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 FGF5P12034 268 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 ITGB6P18564 788 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 POLR2CP19387 275 aaPredicted RBP10.36□□□□□ -0.75
CD44-227ENST00000528086 IVDP26440 423 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 PEBP1P30086 187 aaKnown RBP10.36□□□□□ -0.75
CD44-227ENST00000528086 NSG1P42857 185 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 BASP1P80723 227 aaKnown RBP10.36□□□□□ -0.75
CD44-227ENST00000528086 PRKG2Q13237 762 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 LAMB3Q13751 1172 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 LY6DQ14210 128 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 BRD3Q15059 726 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 ZNF789Q5FWF6 425 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 PCID2Q5JVF3 399 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 CTSL3PQ5NE16 218 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 DCAF12Q5T6F0 453 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 PRAMEF17Q5VTA0 474 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 BROXQ5VW32 411 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 AFTPHQ6ULP2 937 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 KRT222Q8N1A0 295 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 D2HGDHQ8N465 521 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 SLC38A9Q8NBW4 561 aa10.36□□□□□ -0.75
CD44-227ENST00000528086 OR52E1Q8NGJ3 308 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms