RNA–Protein interactions for RNA: ENST00000527326.1

CD44-225, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 718 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-225ENST00000527326 HKDC1Q2TB90 917 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 GPR33Q49SQ1 333 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 BCL7AQ4VC05 210 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZC3H12BQ5HYM0 836 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 SPANXN2Q5MJ10 180 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 GPR158Q5T848 1215 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 NXNL2Q5VZ03 156 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 FAM160B1Q5W0V3 765 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 GPR139Q6DWJ6 353 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 FUT10Q6P4F1 479 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 LRFN4Q6PJG9 635 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 KCNT2Q6UVM3 1135 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TEX261Q6UWH6 196 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 NSMFQ6X4W1 530 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 HACD2Q6Y1H2 254 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 Q6ZS46 218 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 CDHR3Q6ZTQ4 885 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZC3HAV1Q7Z2W4 902 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 R3HCC1LQ7Z5L2 792 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 SNX20Q7Z614 316 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 RHPN2Q8IUC4 686 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 EPHX4Q8IUS5 362 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 SLC44A2Q8IWA5 706 aaPredicted RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 RHOT1Q8IXI2 618 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 OFCC1Q8IZS5 231 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 CLEC4FQ8N1N0 589 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 KLHL36Q8N4N3 616 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 GDPD1Q8N9F7 314 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 DNAAF3Q8N9W5 541 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZMIZ2Q8NF64 920 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 KBTBD8Q8NFY9 601 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 FBXO30Q8TB52 745 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZSCAN18Q8TBC5 510 aaPredicted RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 ZNF566Q969W8 418 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 SLC35C1Q96A29 364 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 KIAA1191Q96A73 305 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 DNAJC19Q96DA6 116 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 RADILQ96JH8 1075 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TBATAQ96M53 351 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZNF285Q96NJ3 590 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 FYTTD1Q96QD9 318 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 NODALQ96S42 347 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 UBL7Q96S82 380 aaPredicted RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 SH2D3AQ9BRG2 576 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TTLL2Q9BWV7 592 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 HDHD5Q9BXW7 423 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 DGCR6LQ9BY27 220 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PBX4Q9BYU1 374 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 C20orf27Q9GZN8 174 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 SLC22A4Q9H015 551 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 QRSL1Q9H0R6 528 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 OR51M1Q9H341 326 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZNF385DQ9H6B1 395 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ABCC13Q9NSE7 274 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 UFSP2Q9NUQ7 469 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TMEM39AQ9NV64 488 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 TBC1D13Q9NVG8 400 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 DNAJC11Q9NVH1 559 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 MCUBQ9NWR8 336 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ACTR10Q9NZ32 417 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 COL20A1Q9P218 1284 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 UBQLN2Q9UHD9 624 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 SLC23A1Q9UHI7 598 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ZNF639Q9UID6 485 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 KIF25Q9UIL4 384 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PACSIN3Q9UKS6 424 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 CLEC4AQ9UMR7 237 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 HSPB11Q9Y547 144 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PCDHB5Q9Y5E4 795 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PCDHA8Q9Y5H6 950 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 PCDHA2Q9Y5H9 948 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 LYVE1Q9Y5Y7 322 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 U3KQ87 197 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 AFDNP55196 1824 aaKnown RBP5.73□□□□□ -1.49
CD44-225ENST00000527326 TNS3Q68CZ2 1445 aa5.73□□□□□ -1.49
CD44-225ENST00000527326 ROBO2Q9HCK4 1378 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 NRAPQ86VF7 1730 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 TNS1Q9HBL0 1735 aaKnown RBP5.72□□□□□ -1.49
CD44-225ENST00000527326 hCG_1807616A0A1W2PRN6 198 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 DHRS12A0PJE2 317 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 CCDC78A2IDD5 438 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 MPTX1A8MV57 137 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 H7C2Y5 167 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 EI24O14681 340 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 SLC30A4O14863 429 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 PCDH17O14917 1159 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 SGCEO43556 437 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 SIGLEC6O43699 453 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 RFPL1O75677 317 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 SRP72O76094 671 aaKnown RBP5.72□□□□□ -1.49
CD44-225ENST00000527326 CNTN5O94779 1100 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 SOX30O94993 753 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 CCNB2O95067 398 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 WISP1O95388 367 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 DHFRP00374 187 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 AHSGP02765 367 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 RAF1P04049 648 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 C2P06681 752 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 ITGAMP11215 1152 aa5.72□□□□□ -1.49
CD44-225ENST00000527326 RALAP11233 206 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 60.2 ms