RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 AKAP1Q92667 903 aaKnown RBP eCLIP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ESR2Q92731 530 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HDAC2Q92769 488 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CELF1Q92879 486 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 UFD1Q92890 307 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ATP2A3Q93084 1043 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PTP4A1Q93096 173 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 C12orf43Q96C57 262 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MSANTD3Q96H12 275 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ASB2Q96Q27 587 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TGS1Q96RS0 853 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GDF15Q99988 308 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HERPUD2Q9BSE4 406 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 EFHD1Q9BUP0 239 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TRIM62Q9BVG3 475 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TEKT3Q9BXF9 490 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC19A3Q9BZV2 496 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC13A1Q9BZW2 595 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TWSG1Q9GZX9 223 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 QRSL1Q9H0R6 528 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 XKR8Q9H6D3 395 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SMYD3Q9H7B4 428 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MVB12BQ9H7P6 319 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CAB39LQ9H9S4 337 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MCCC2Q9HCC0 563 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HMG20AQ9NP66 347 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 IFT46Q9NQC8 304 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 PRDM11Q9NQV5 511 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GLRX2Q9NS18 164 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HOMER2Q9NSB8 354 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ACOXLQ9NUZ1 547 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 HPF1Q9NWY4 346 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 B3GNT2Q9NY97 397 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 COA4Q9NYJ1 87 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GLTPQ9NZD2 209 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 OR6C2Q9NZP2 312 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 FETUBQ9UGM5 382 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CD300AQ9UGN4 299 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GLS2Q9UI32 602 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 SLC24A2Q9UI40 661 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TRMT6Q9UJA5 497 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ENPP5Q9UJA9 477 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF112Q9UJU3 913 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 DBNLQ9UJU6 430 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 ZNF221Q9UK13 617 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MAN2B2Q9Y2E5 1009 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MRPS7Q9Y2R9 242 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 GDAQ9Y2T3 454 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 TMX2Q9Y320 296 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 NEU2Q9Y3R4 380 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CDY2AQ9Y6F7 541 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CHD4Q14839 1912 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 CUL7Q14999 1698 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 MYH9P35579 1960 aaKnown RBP3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 RPTORQ8N122 1335 aa3.67□□□□□ -1.82
CLNS1A-209ENST00000527299 KAT6AQ92794 2004 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TOPBP1Q92547 1522 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 SCN4AP35499 1836 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 MYH14Q7Z406 1995 aaKnown RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 A0A0G2JMP0 313 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 GSTTP1A0A1W2PQM5 241 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 hCG_1642624A0A1W2PR95 340 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 MTMR11A4FU01 709 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 LEUTXA8MZ59 168 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 NT5C1B-RDH14C9J2C7 533 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 I3L4J1 428 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 J3QRK9 145 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 SH2B2O14492 632 aaPredicted RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CTDSP2O14595 271 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PPP6R2O75170 966 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 RFPL2O75678 378 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 SURF6O75683 361 aaKnown RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CDC123O75794 336 aaPredicted RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CLPXO76031 633 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TM7SF2O76062 418 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TRIM16O95361 564 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CBX6O95503 412 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 NADKO95544 446 aaPredicted RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 DHFRP00374 187 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 GOT2P00505 430 aaKnown RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PLGP00747 810 aaPredicted RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PLEKP08567 350 aaPredicted RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TRAPPC2P0DI81 140 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TRAPPC2BP0DI82 140 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 ATP6V1B1P15313 513 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CYP11B1P15538 503 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 STMN1P16949 149 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 IFNAR1P17181 557 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TAC1P20366 129 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 TNFAIP3P21580 790 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 RPS6KB1P23443 525 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PIK3R1P27986 724 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PDIA3P30101 505 aaKnown RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 NMT1P30419 496 aaKnown RBP3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CHRNA5P30532 468 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 CCKBRP32239 447 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PTPN7P35236 360 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 PGM1P36871 562 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 HNF4AP41235 474 aa3.66□□□□□ -1.82
CLNS1A-209ENST00000527299 HTR2BP41595 481 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms