RNA–Protein interactions for RNA: ENST00000527003.5

C11orf54-204, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 5

Gene C11orf54, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-204ENST00000527003 GPX6P59796 221 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CACNG1Q06432 222 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 DPTQ07507 201 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CNTN1Q12860 1018 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SGCGQ13326 291 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FASTKD3Q14CZ7 662 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CNGA3Q16281 694 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CDKN3Q16667 212 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PRSS53Q2L4Q9 553 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF284Q2VY69 593 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FASTKD1Q53R41 847 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SYCP2LQ5T4T6 812 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PIP5KL1Q5T9C9 394 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GRTP1Q5TC63 336 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 AGBL4Q5VU57 503 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 LRRC66Q68CR7 880 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 NAIF1Q69YI7 327 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 POMZP3Q6PJE2 187 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CRTC1Q6UUV9 634 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 LIPIQ6XZB0 460 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SNX20Q7Z614 316 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 LCA5Q86VQ0 697 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 KCNMB4Q86W47 210 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SFTPA1Q8IWL2 248 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 GSPT2Q8IYD1 628 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 TTC30BQ8N4P2 665 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 HDDC3Q8N4P3 179 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CELF2-AS1Q8N7Q2 184 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 MDGA1Q8NFP4 955 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PJA1Q8NG27 643 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 OR4K2Q8NGD2 314 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 OR13J1Q8NGT2 312 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 OR2T34Q8NGX1 318 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 OR4L1Q8NH43 312 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 HDAC10Q969S8 669 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 VOPP1Q96AW1 172 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF669Q96BR6 464 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 MFSD3Q96ES6 412 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 TSPAN17Q96FV3 270 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CERS2Q96G23 380 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CFAP36Q96G28 342 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CDKN2AIPNLQ96HQ2 116 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ZNF514Q96K75 400 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 MRGPRX1Q96LB2 322 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 UHRF1Q96T88 793 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ACOX2Q99424 681 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ZSCAN5AQ9BUG6 496 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 BTBD1Q9H0C5 482 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FAM83DQ9H4H8 585 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CD248Q9HCU0 757 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 MED4Q9NPJ6 270 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ITM2CQ9NQX7 267 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 INTS10Q9NVR2 710 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SMOXQ9NWM0 555 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FBXL12Q9NXK8 326 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 IL17CQ9P0M4 197 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SENP1Q9P0U3 644 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 BCCIPQ9P287 314 aaKnown RBP eCLIP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PSMC3IPQ9P2W1 217 aaPredicted RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 B4GALT6Q9UBX8 382 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 MUTYHQ9UIF7 546 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FBXL7Q9UJT9 491 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SARDHQ9UL12 918 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 PLAAQ9Y263 795 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 FADS3Q9Y5Q0 445 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 ARL5AQ9Y689 179 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 COMMD10Q9Y6G5 202 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 DYNC1LI1Q9Y6G9 523 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 SLC30A1Q9Y6M5 507 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 HELZP42694 1942 aaKnown RBP3.79□□□□□ -1.8
C11orf54-204ENST00000527003 DENND4AQ7Z401 1863 aa3.79□□□□□ -1.8
C11orf54-204ENST00000527003 CHD5Q8TDI0 1954 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TRBV23OR9-2A0A075B6M9 112 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3DA0A087WVF3 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3IA0A087WXS9 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3EA0A087X179 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3KA0A087X1G2 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 GLYATL1P3A0A0U1RQE8 302 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 A0A1B0GTL3 188 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CCDC189A1A4V9 331 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CCDC162PA2VCL2 907 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3FA6NER0 549 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NPIPB15A6NHN6 443 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 AGAP14A8MT82 685 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 HMGB1P1B2RPK0 211 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TBC1D3LB9A6J9 549 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 GOLGA8KD6RF30 607 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 KPNA5O15131 536 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 MID1O15344 667 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CD3EAPO15446 510 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 RGS16O15492 202 aaPredicted RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 NDUFS3O75489 264 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 FAM155BO75949 473 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 TM7SF2O76062 418 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 SRP72O76094 671 aaKnown RBP3.78□□□□□ -1.8
C11orf54-204ENST00000527003 AP2A2O94973 939 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 PCDH8O95206 1070 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 CLDN7O95471 211 aa3.78□□□□□ -1.8
C11orf54-204ENST00000527003 GOT2P00505 430 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms