RNA–Protein interactions for RNA: ENST00000526066.5

CCS-204, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 872 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-204ENST00000526066 HTR1BP28222 390 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 AKT1P31749 480 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 GP5P40197 560 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 CSE1LP55060 971 aaKnown RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 PPARDQ03181 441 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 TMEM115Q12893 351 aaPredicted RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 EIF2B5Q13144 721 aaKnown RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 CLN3Q13286 438 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 C1orf61Q13536 156 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 KHDC1Q4VXA5 237 aaKnown RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 FBXO38Q6PIJ6 1188 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 MACC1Q6ZN28 852 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 USP53Q70EK8 1073 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 ADGRG6Q86SQ4 1221 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 TRIM74Q86UV6 250 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 SLC35F3Q8IY50 421 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 FSTL5Q8N475 847 aaPredicted RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 PPM1NQ8N819 430 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 UHMK1Q8TAS1 419 aaKnown RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 WDR92Q96MX6 357 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 GFM1Q96RP9 751 aaKnown RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 MCMBPQ9BTE3 642 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 RMI1Q9H9A7 625 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 TXNDC16Q9P2K2 825 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 SLC17A6Q9P2U8 582 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 GULP1Q9UBP9 304 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 KLF15Q9UIH9 416 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 CORO1CQ9ULV4 474 aaPredicted RBP16.96■□□□□ 0.31
CCS-204ENST00000526066 SLC17A4Q9Y2C5 497 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 PSAT1Q9Y617 370 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 RP1P56715 2156 aa16.96■□□□□ 0.31
CCS-204ENST00000526066 PIEZO2Q9H5I5 2752 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 EXOC1LA0A1B0GW35 172 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 A0A1W2PNU3 283 aaPredicted RBP16.95■□□□□ 0.3
CCS-204ENST00000526066 QSOX1O00391 747 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 PLD2O14939 933 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 AP2A2O94973 939 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 AHSGP02765 367 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 CTSEP14091 401 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 GABRB3P28472 473 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 CD151P48509 253 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 MPP1Q00013 466 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 B4GALNT1Q00973 533 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 NFATC3Q12968 1075 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 EFTUD2Q15029 972 aaKnown RBP eCLIP16.95■□□□□ 0.33e-6■■□□□ 11.6
CCS-204ENST00000526066 ELOCQ15369 112 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 KIF26BQ2KJY2 2108 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 XKR5Q6UX68 686 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 STRA8Q7Z7C7 330 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 CNPY4Q8N129 248 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 FBXO39Q8N4B4 442 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 SLC44A1Q8WWI5 657 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 SCARF2Q96GP6 870 aaPredicted RBP16.95■□□□□ 0.3
CCS-204ENST00000526066 LIN37Q96GY3 246 aaPredicted RBP16.95■□□□□ 0.3
CCS-204ENST00000526066 PRR11Q96HE9 360 aaPredicted RBP16.95■□□□□ 0.3
CCS-204ENST00000526066 ZNF514Q96K75 400 aaPredicted RBP16.95■□□□□ 0.3
CCS-204ENST00000526066 LRRC61Q9BV99 259 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 CLPBQ9H078 707 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 P2RY12Q9H244 342 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 FBXO6Q9NRD1 293 aaPredicted RBP16.95■□□□□ 0.3
CCS-204ENST00000526066 ATXN10Q9UBB4 475 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 COMMD10Q9Y6G5 202 aa16.95■□□□□ 0.3
CCS-204ENST00000526066 TMEM202A6NGA9 273 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 CYSRT1A8MQ03 144 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 F8W8V4 182 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 CHUKO15111 745 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 NUAK1O60285 661 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 MTX2O75431 263 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 PIAS1O75925 651 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 CDK14O94921 469 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 HAUS5O94927 633 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 ESR1P03372 595 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 CEACAM5P06731 702 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 IVLP07476 585 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 JMJD7P0C870 316 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 ATP1B2P14415 290 aaPredicted RBP16.94■□□□□ 0.3
CCS-204ENST00000526066 CSRP3P50461 194 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 GTF2H3Q13889 308 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 ZNF789Q5FWF6 425 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 TPRG1LQ5T0D9 272 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 GRTP1Q5TC63 336 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 CNSTQ6PJW8 725 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 RAB11FIP2Q7L804 512 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 ZC3HC1Q86WB0 502 aaKnown RBP16.94■□□□□ 0.3
CCS-204ENST00000526066 ARL10Q8N8L6 244 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 RASGEF1AQ8N9B8 481 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 ZSCAN1Q8NBB4 408 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 OR56A4Q8NGH8 313 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 PAFAH2Q99487 392 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 DHRS4Q9BTZ2 278 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 OR2AG1Q9H205 316 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 RHOJQ9H4E5 214 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 SLC24A2Q9UI40 661 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 ZNF180Q9UJW8 692 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 TMEM98Q9Y2Y6 226 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 PCDHGA7Q9Y5G6 932 aa16.94■□□□□ 0.3
CCS-204ENST00000526066 COL27A1Q8IZC6 1860 aaPredicted RBP16.94■□□□□ 0.3
CCS-204ENST00000526066 UBA6A0AVT1 1052 aaPredicted RBP16.93■□□□□ 0.3
CCS-204ENST00000526066 H3BMM5 538 aa16.93■□□□□ 0.3
CCS-204ENST00000526066 YY2O15391 372 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms