RNA–Protein interactions for RNA: ENST00000525970.5

CSDE1-211, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 503 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-211ENST00000525970 KHKP50053 298 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 CLDN20P56880 219 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 TAS2R38P59533 333 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PTENP60484 403 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 SNRPEP62304 92 aaKnown RBP4.41□□□□□ -1.7
CSDE1-211ENST00000525970 POLR2LP62875 67 aaKnown RBP4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PPATQ06203 517 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 FOXM1Q08050 763 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 TRAF1Q13077 416 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 UBE2V1Q13404 147 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PTGR1Q14914 329 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 CDO1Q16878 200 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 SLC39A12Q504Y0 691 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PRR27Q6MZM9 219 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 KCTD18Q6PI47 426 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-211ENST00000525970 BRAT1Q6PJG6 821 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 CNSTQ6PJW8 725 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 MEPCEQ7L2J0 689 aaKnown RBP4.41□□□□□ -1.7
CSDE1-211ENST00000525970 ZNF367Q7RTV3 350 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 FAM219AQ8IW50 185 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PM20D2Q8IYS1 436 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 DSELQ8IZU8 1212 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 OR2AJ1Q8NGZ0 328 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 SPATA20Q8TB22 786 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 WFIKKN2Q8TEU8 576 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 RND1Q92730 232 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 SLAMF9Q96A28 289 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 MIB2Q96AX9 1013 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 PRMT6Q96LA8 375 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-211ENST00000525970 APOLD1Q96LR9 279 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 CPNE1Q99829 537 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 TMEM206Q9H813 350 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 C17orf75Q9HAS0 396 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 LMAN1LQ9HAT1 526 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 TUFT1Q9NNX1 390 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 ZBTB40Q9NUA8 1239 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 WWOXQ9NZC7 414 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 SEPT10Q9P0V9 454 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 RHCGQ9UBD6 479 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 POLLQ9UGP5 575 aa4.41□□□□□ -1.7
CSDE1-211ENST00000525970 ARMCX3Q9UH62 379 aaPredicted RBP4.41□□□□□ -1.7
CSDE1-211ENST00000525970 IGKV2D-30A0A075B6S6 120 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 MS4A18H0YCH9 400 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 SLC33A1O00400 549 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 CLDN4O14493 209 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 ZBTB14O43829 449 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 OAZ2O95190 189 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 OR2T7P0C7T2 308 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 ARSBP15848 533 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 TNFRSF1BP20333 461 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 EEF1B2P24534 225 aaKnown RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 CALRP27797 417 aaKnown RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 RFX5P48382 616 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 ASCL1P50553 236 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 LINC00205P59089 165 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 STARD6P59095 220 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 STX1BP61266 288 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 CRYZQ08257 329 aaKnown RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 RCN2Q14257 317 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 HNF4GQ14541 408 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 SMC1AQ14683 1233 aaKnown RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 UGCGQ16739 394 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 FAM69BQ5VUD6 431 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 ALS2CLQ60I27 953 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 SLC36A4Q6YBV0 504 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 TMEM182Q6ZP80 229 aaPredicted RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 Q75L30 129 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 SPATA21Q7Z572 469 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 TLK2Q86UE8 772 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 ZC3HC1Q86WB0 502 aaKnown RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 ACVR1CQ8NER5 493 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 OR7G3Q8NG95 312 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 URB1-AS1Q96HZ7 61 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 MARK4Q96L34 752 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 SEMA3CQ99985 751 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 UTP14AQ9BVJ6 771 aaKnown RBP4.4□□□□□ -1.71
CSDE1-211ENST00000525970 CACNG6Q9BXT2 260 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 DPAGT1Q9H3H5 408 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 MYNNQ9NPC7 610 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 LRP12Q9Y561 859 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 CACNA1IQ9P0X4 2223 aa4.4□□□□□ -1.71
CSDE1-211ENST00000525970 TTC3P53804 2025 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 A0A1W2PRV1 198 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 OR2M5A3KFT3 312 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 GOLGA6L9A6NEM1 432 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 PLK4O00444 970 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 HS3ST1O14792 307 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 ZBTB43O43298 467 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 XRCC3O43542 346 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 TSPAN1O60635 241 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 LCATP04180 440 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 VIMP08670 466 aaKnown RBP4.39□□□□□ -1.71
CSDE1-211ENST00000525970 CD22P20273 847 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 MPZP25189 248 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 CD27P26842 260 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 STX2P32856 288 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 CD86P42081 329 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 KCNJ1P48048 391 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 CTSCP53634 463 aa4.39□□□□□ -1.71
CSDE1-211ENST00000525970 SEC61BP60468 96 aaKnown RBP4.39□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms