RNA–Protein interactions for RNA: ENST00000525124.1

DEPDC1-205, Transcript of DEP domain containing 1, humanhuman

TSL 3

Gene DEPDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1-205ENST00000525124 SMOXQ9NWM0 555 aa8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 DDX56Q9NY93 547 aaKnown RBP8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 IL17CQ9P0M4 197 aa8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 RARRES3Q9UL19 164 aa8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 SHOC2Q9UQ13 582 aa8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 HEY1Q9Y5J3 304 aa8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP8.18□□□□□ -1.12e-8■■□□□ 13.3
DEPDC1-205ENST00000525124 UTP20O75691 2785 aaKnown RBP8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 SNRNP200O75643 2136 aaKnown RBP8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 SPTBP11277 2137 aa8.18□□□□□ -1.1
DEPDC1-205ENST00000525124 IGHV5-51A0A0C4DH38 117 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 LRRD1A4D1F6 860 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TLCD2A6NGC4 264 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 OR52A4PA6NMU1 304 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 MTSS1O43312 755 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 KIF1CO43896 1103 aaKnown RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 MT-CYBP00156 380 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PIRTP0C851 137 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 MSL3P1P0C860 447 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PYGMP11217 842 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 LPOP22079 712 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PTPN3P26045 913 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 RPL10P27635 214 aaKnown RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PTPN4P29074 926 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 SLC1A1P43005 524 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PRKD1Q15139 912 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TAZQ16635 292 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 IZUMO3Q5VZ72 239 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 METRNLQ641Q3 311 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 ASB18Q6ZVZ8 466 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 AMZ2Q86W34 360 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TRAPPC5Q8IUR0 188 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TTC30BQ8N4P2 665 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 GALNT11Q8NCW6 608 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 SPATA22Q8NHS9 363 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 CT55Q8WUE5 264 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TTC25Q96NG3 672 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 AGAP3Q96P47 875 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 VAT1Q99536 393 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 MAK16Q9BXY0 300 aaKnown RBP8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TWSG1Q9GZX9 223 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 FAM153AQ9UHL3 310 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 LNPEPQ9UIQ6 1025 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 TLK1Q9UKI8 766 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PLAAQ9Y263 795 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 DNAJC16Q9Y2G8 782 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 WDR37Q9Y2I8 494 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 ESPL1Q14674 2120 aa8.17□□□□□ -1.1
DEPDC1-205ENST00000525124 PIPSLA2A3N6 862 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 NBASA2RRP1 2371 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 OR5K3A6NET4 321 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 K7EM74 188 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 USP9YO00507 2555 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 GAPDHSO14556 408 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 AURKAO14965 403 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 SEC16AO15027 2179 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CPNE3O75131 537 aaKnown RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 MTX2O75431 263 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 KATNA1O75449 491 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CEACAM4O75871 244 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 TIAF1O95411 115 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 RAB40ALP0C0E4 278 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 FOLR1P15328 257 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 HLA-DPA1P20036 260 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 NR1D1P20393 614 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CASP14P31944 242 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CD68P34810 354 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 SPAM1P38567 509 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 IDH3AP50213 366 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 DRG2P55039 364 aaKnown RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 RPS15P62841 145 aaKnown RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 TUBB4BP68371 445 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 HSD11B2P80365 405 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 TUBB3Q13509 450 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 TUBB2AQ13885 445 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 TRIM14Q14142 442 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 MESDQ14696 234 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 SEPT7Q16181 437 aaKnown RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 RPE65Q16518 533 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 LRRK2Q5S007 2527 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 ZFYVE27Q5T4F4 411 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CAPRIN2Q6IMN6 1127 aaKnown RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 PWWP2BQ6NUJ5 590 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 IRGCQ6NXR0 463 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CAVIN1Q6NZI2 390 aaKnown RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 KDELC1Q6UW63 502 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 NPNTQ6UXI9 565 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 FAM92BQ6ZTR7 304 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 GPR150Q8NGU9 434 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 SLC35G2Q8TBE7 412 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 ADAMTS17Q8TE56 1095 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 CPLX3Q8WVH0 158 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 LINC00615Q96LM1 132 aaPredicted RBP8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 FCRL5Q96RD9 977 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 DNAJC7Q99615 494 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 MAP3K3Q99759 626 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 TUBB2BQ9BVA1 445 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 PACSIN1Q9BY11 444 aa8.16□□□□□ -1.1
DEPDC1-205ENST00000525124 ACTL8Q9H568 366 aa8.16□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms