RNA–Protein interactions for RNA: ENST00000522730.1

CTNNA1-235, Transcript of catenin alpha 1, humanhuman

TSL 2

Gene CTNNA1, Length 750 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-235ENST00000522730 DENND5AQ6IQ26 1287 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 TMEM135Q86UB9 458 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 SERPINA9Q86WD7 417 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 OOSP2Q86WS3 158 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 NXPE1Q8N323 547 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 LRRC57Q8N9N7 239 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 C9orf43Q8TAL5 461 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 CT55Q8WUE5 264 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 APOBEC4Q8WW27 367 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 LCN9Q8WX39 176 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 ULK4Q96C45 1275 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 ABHD17AQ96GS6 310 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 DNAJC1Q96KC8 554 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 PPM1MQ96MI6 270 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 NRTNQ99748 197 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 TWSG1Q9GZX9 223 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 ADNPQ9H2P0 1102 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 AKIRIN1Q9H9L7 192 aaPredicted RBP9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 FGF21Q9NSA1 209 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 SMOXQ9NWM0 555 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 EPHA6Q9UF33 1036 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 SLC24A2Q9UI40 661 aa9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 R3HDM2Q9Y2K5 976 aaKnown RBP9.99□□□□□ -0.81
CTNNA1-235ENST00000522730 TCRBV7S2A1N4TA0A589 114 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 GSAPA4D1B5 854 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 OR5K3A6NET4 321 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 SLC9B1P1A6NJY1 282 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 BTNL10A8MVZ5 291 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 LDB2O43679 373 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 MT-ND3P03897 115 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 FURINP09958 794 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 CDH3P22223 829 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 PTPN7P35236 360 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 HADHAP40939 763 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 LMAN1P49257 510 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 CSRP3P50461 194 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 ZNF140P52738 457 aaPredicted RBP9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 HSD11B2P80365 405 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 ACY1Q03154 408 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 TLE1Q04724 770 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 PRKAA1Q13131 559 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 MAP7Q14244 749 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 BRD3Q15059 726 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 BCL7AQ4VC05 210 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 CCDC38Q502W7 563 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 TMTC4Q5T4D3 741 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 ZNF449Q6P9G9 518 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 SNX20Q7Z614 316 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 TMEM126BQ8IUX1 230 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 SYCE1Q8N0S2 351 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 CLDN19Q8N6F1 224 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 TTC13Q8NBP0 860 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 SLC41A2Q96JW4 573 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 RMDN2Q96LZ7 410 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 PPP1R2P1Q96PQ5 205 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 RUFY1Q96T51 708 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 CCM2Q9BSQ5 444 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 TMEM121Q9BTD3 319 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 RAB33BQ9H082 229 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 KLHL25Q9H0H3 589 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 SRMSQ9H3Y6 488 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 LHX9Q9NQ69 397 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 ZDHHC3Q9NYG2 299 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 SMARCAL1Q9NZC9 954 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 ZKSCAN5Q9Y2L8 839 aa9.98□□□□□ -0.81
CTNNA1-235ENST00000522730 UBR5O95071 2799 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 TLCD2A6NGC4 264 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 IFRD1O00458 451 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 MAP3K7O43318 606 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 SGTAO43765 313 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 CREG1O75629 220 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 SCRG1O75711 98 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 CCDC175P0C221 793 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 NR1D1P20393 614 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 PDHA2P29803 388 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 PREPP48147 710 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 GDF10P55107 478 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 RPS18P62269 152 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 MSLNQ13421 630 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 SNX1Q13596 522 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 DNASE1L3Q13609 305 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 IGFBP7Q16270 282 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 GPR33Q49SQ1 333 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 PRAMEF17Q5VTA0 474 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 CAPRIN2Q6IMN6 1127 aaKnown RBP9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 CYB5D1Q6P9G0 228 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 NAPRTQ6XQN6 538 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 DNAAF3Q8N9W5 541 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 HM13Q8TCT9 377 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 HEXDCQ8WVB3 486 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 ATG4AQ8WYN0 398 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 MR1Q95460 341 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 TLR10Q9BXR5 811 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 XKR8Q9H6D3 395 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 KIR3DX1Q9H7L2 352 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 LRRC40Q9H9A6 602 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 KCND1Q9NSA2 647 aa9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 FEZ2Q9UHY8 353 aaPredicted RBP9.97□□□□□ -0.81
CTNNA1-235ENST00000522730 KCND3Q9UK17 655 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms