RNA–Protein interactions for RNA: ENST00000522556.1

CLK4-211, Transcript of CDC like kinase 4, humanhuman

TSL 1 (best)

Gene CLK4, Length 1,249 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-211ENST00000522556 P2RY12Q9H244 342 aa17.42■□□□□ 0.38
CLK4-211ENST00000522556 XAB2Q9HCS7 855 aaKnown RBP17.42■□□□□ 0.38
CLK4-211ENST00000522556 ZCWPW2A0A1B0GU75 182 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 SLC5A10A0PJK1 596 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 EFCAB7A8K855 629 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 AP3B1O00203 1094 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 HGSO14964 777 aaPredicted RBP17.41■□□□□ 0.38
CLK4-211ENST00000522556 TP73O15350 636 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 CAPN5O15484 640 aaPredicted RBP17.41■□□□□ 0.38
CLK4-211ENST00000522556 ETF1P62495 437 aaKnown RBP17.41■□□□□ 0.38
CLK4-211ENST00000522556 SARNPP82979 210 aaKnown RBP17.41■□□□□ 0.38
CLK4-211ENST00000522556 DR1Q01658 176 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 C2orf54Q08AI8 447 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 TGIF1Q15583 401 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 LYPLAL1Q5VWZ2 237 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 IRGCQ6NXR0 463 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 CERS6Q6ZMG9 384 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 PDZD3Q86UT5 571 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 FAM129CQ86XR2 697 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 IGDCC3Q8IVU1 814 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 ART4Q93070 314 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 FAM136AQ96C01 138 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 C9orf72Q96LT7 481 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 KRT12Q99456 494 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 CTRCQ99895 268 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 HGH1Q9BTY7 390 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 TRIM31Q9BZY9 425 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 KIR3DX1Q9H7L2 352 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 APMAPQ9HDC9 416 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.41■□□□□ 0.38
CLK4-211ENST00000522556 CDYLQ9Y232 598 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 MAD1L1Q9Y6D9 718 aa17.41■□□□□ 0.38
CLK4-211ENST00000522556 CFAP47Q6ZTR5 3102 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 FAM237BA0A1B0GVD1 139 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 UBA6A0AVT1 1052 aaPredicted RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 SDR42E2A6NKP2 422 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 FTH1P02794 183 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 OR56A5P0C7T3 313 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 CASQ1P31415 396 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 SEPHS1P49903 392 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 EIF3BP55884 814 aaKnown RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 SH3BP2P78314 561 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 PRKG2Q13237 762 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 TRA2AQ13595 282 aaKnown RBP eCLIP17.4■□□□□ 0.38
CLK4-211ENST00000522556 DHX34Q14147 1143 aaKnown RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 TYSND1Q2T9J0 566 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 HP1BP3Q5SSJ5 553 aaPredicted RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 FBXO38Q6PIJ6 1188 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 CENPUQ71F23 418 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 TMEM135Q86UB9 458 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 ZFAND4Q86XD8 727 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 DENND6AQ8IWF6 608 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 RBM12BQ8IXT5 1001 aaKnown RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 AGBL5Q8NDL9 886 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 OR5AR1Q8NGP9 310 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 LPGAT1Q92604 370 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 FERD3LQ96RJ6 166 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 DPYSL5Q9BPU6 564 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 VPS37BQ9H9H4 285 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 PLAC1Q9HBJ0 212 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 SIDT1Q9NXL6 827 aaKnown RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 SAMD15Q9P1V8 674 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 ANAPC5Q9UJX4 755 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 RPS6KL1Q9Y6S9 549 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 LAMA5O15230 3695 aa17.4■□□□□ 0.38
CLK4-211ENST00000522556 DSPP15924 2871 aaKnown RBP17.4■□□□□ 0.38
CLK4-211ENST00000522556 KLHL33A6NCF5 533 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 OR6C74A6NCV1 312 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 PRMT5O14744 637 aaPredicted RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 LIN7AO14910 233 aaPredicted RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 NIPSNAP2O75323 286 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 TPBGLP0DKB5 382 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 ACADLP28330 430 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 CSTF2P33240 577 aaKnown RBP eCLIP17.39■□□□□ 0.37
CLK4-211ENST00000522556 PAFAH1B1P43034 410 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 TTPAP49638 278 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 TLE3Q04726 772 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 DHX9Q08211 1270 aaKnown RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 AARS2Q5JTZ9 985 aaKnown RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 ANKS6Q68DC2 871 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 PLXDC1Q8IUK5 500 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 LMNTD1Q8N9Z9 388 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 ZNF248Q8NDW4 579 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 OR52E1Q8NGJ3 308 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 KCNE4Q8WWG9 221 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 C16orf45Q96MC5 204 aaPredicted RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 BIRC8Q96P09 236 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 EPB41L1Q9H4G0 881 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 XKR8Q9H6D3 395 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 GALPQ9UBC7 116 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 CIDEBQ9UHD4 219 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 TSR3Q9UJK0 312 aaKnown RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 PLAGL1Q9UM63 463 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 RUVBL2Q9Y230 463 aaKnown RBP17.39■□□□□ 0.37
CLK4-211ENST00000522556 B3GALT1Q9Y5Z6 326 aa17.39■□□□□ 0.37
CLK4-211ENST00000522556 IGHV5-51A0A0C4DH38 117 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 KRT87PA6NCN2 255 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 OR5K3A6NET4 321 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 CCDC188H7C350 402 aa17.38■□□□□ 0.37
CLK4-211ENST00000522556 NDUFS3O75489 264 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms