RNA–Protein interactions for RNA: ENST00000521553.5

RUNX1T1-234, Transcript of RUNX1 translocation partner 1, humanhuman

TSL 1 (best) BASIC

Gene RUNX1T1, Length 1,346 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1T1-234ENST00000521553 SCAMP4Q969E2 229 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 FUBP1Q96AE4 644 aaKnown RBP6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 TADA1Q96BN2 335 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 PDXPQ96GD0 296 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 MS4A14Q96JA4 679 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 PBKQ96KB5 322 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 TRIB3Q96RU7 358 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 SRPK1Q96SB4 655 aaKnown RBP6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 OSBPL9Q96SU4 736 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 NAP1L3Q99457 506 aaPredicted RBP6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 CDC6Q99741 560 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 GORASP1Q9BQQ3 440 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 RIOK2Q9BVS4 552 aaKnown RBP6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 SPATA16Q9BXB7 569 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 AP1M1Q9BXS5 423 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 TCEAL2Q9H3H9 227 aaPredicted RBP6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 USP29Q9HBJ7 922 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 MAGEE1Q9HCI5 957 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 BPIFA1Q9NP55 256 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 MRPL40Q9NQ50 206 aaKnown RBP6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 GPR27Q9NS67 375 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 UCKL1Q9NWZ5 548 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 SPASTQ9UBP0 616 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 PKP3Q9Y446 797 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 SPO11Q9Y5K1 396 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 FRYLO94915 3013 aa6.36□□□□□ -1.39
RUNX1T1-234ENST00000521553 LOC285095A0A1B0GVY8 99 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PRSS38A1L453 326 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 TMEM202A6NGA9 273 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 MROH6A6NGR9 719 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PSMD3O43242 534 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 BUD23O43709 281 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 FZD7O75084 574 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 GCATO75600 419 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 METTL18O95568 372 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 GAS8O95995 478 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PYGLP06737 847 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 ANXA6P08133 673 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 ATXN1LP0C7T5 689 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 ETS1P14921 441 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 THBS2P35442 1172 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 GNPDA1P46926 289 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 RXRGP48443 463 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 GIPRP48546 466 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 VPS41P49754 854 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 HK3P52790 923 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 SRP54P61011 504 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 BASP1P80723 227 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 TMPRSS15P98073 1019 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 CDK3Q00526 305 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 TRIP13Q15645 432 aaPredicted RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 OASLQ15646 514 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 CCNG2Q16589 344 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PARP6Q2NL67 630 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 DPY19L1Q2PZI1 675 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 ALG11Q2TAA5 492 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 DEFB133Q30KQ1 61 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 BORAQ6PGQ7 559 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 TECPR1Q7Z6L1 1165 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PIP4P1Q86T03 277 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 Q8N1X5 172 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 DNAAF3Q8N9W5 541 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 GDAP1Q8TB36 358 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 OR1E3Q8WZA6 343 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 ANAPC16Q96DE5 110 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 HIC2Q96JB3 615 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 CAPZA3Q96KX2 299 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 LYSMD1Q96S90 227 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 AGAP2Q99490 1192 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 LRRC61Q9BV99 259 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 SSBP3Q9BWW4 388 aaPredicted RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 LGR4Q9BXB1 951 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 FAM83DQ9H4H8 585 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 SYNDIG1Q9H7V2 258 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 LRRC40Q9H9A6 602 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 HOMER3Q9NSC5 361 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PIH1D1Q9NWS0 290 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 NLGN3Q9NZ94 848 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 SMARCAL1Q9NZC9 954 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 HACD3Q9P035 362 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 SIRPGQ9P1W8 387 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PAK5Q9P286 719 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 SNX12Q9UMY4 172 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 APOBEC2Q9Y235 224 aaKnown RBP6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 ZKSCAN5Q9Y2L8 839 aa6.35□□□□□ -1.39
RUNX1T1-234ENST00000521553 PLXNB3Q9ULL4 1909 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 MED19A0JLT2 244 aaPredicted RBP6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 CCDC78A2IDD5 438 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 CTAGE9A4FU28 777 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 RGSL1A5PLK6 1076 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 C2orf81A6NN90 581 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 B4DGG1 531 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 TRIM38O00635 465 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 ZNF185O15231 689 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 STX7O15400 261 aaKnown RBP6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 TNFSF14O43557 240 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 CRTAMO95727 393 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 AP2A1O95782 977 aa6.34□□□□□ -1.39
RUNX1T1-234ENST00000521553 SOD1P00441 154 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms