RNA–Protein interactions for RNA: ENST00000519914.5

SDC2-204, Transcript of syndecan 2, humanhuman

TSL 2 BASIC

Gene SDC2, Length 1,318 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-204ENST00000519914 MLYCDO95822 493 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TBX18O95935 607 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TFAP2AP05549 437 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 GPIP06744 558 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 MSL3P1P0C860 447 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZCCHC18P0CG32 403 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 HSPA8P11142 646 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 LBPP18428 481 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 RPS3P23396 243 aaKnown RBP eCLIP4.98□□□□□ -1.616e-7■■■□□ 19.1
SDC2-204ENST00000519914 PMLP29590 882 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 OR1E1P30953 314 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SLC6A4P31645 630 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 GRK4P32298 578 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZFP36L2P47974 494 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 ALDH3B2P48448 385 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PPP3CCP48454 512 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PKNOX1P55347 436 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 EEFSECP57772 596 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 STX1BP61266 288 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 CDKL1Q00532 357 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 MYBPC1Q00872 1141 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 CLCQ05315 142 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PRKCZQ05513 592 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 RCAN2Q14206 197 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SLBPQ14493 270 aaKnown RBP eCLIP4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZNF235Q14590 738 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 GPNMBQ14956 572 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PCBP2Q15366 365 aaKnown RBP eCLIP4.98□□□□□ -1.613e-18■■■■□ 25.1
SDC2-204ENST00000519914 CYTH1Q15438 398 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 CRY1Q16526 586 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 NKG7Q16617 165 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PPP1R3AQ16821 1122 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 INO80DQ53TQ3 878 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 AARS2Q5JTZ9 985 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 C10orf120Q5SQS8 335 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SDHAF4Q5VUM1 108 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 IL23RQ5VWK5 629 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ANKS6Q68DC2 871 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 FUT10Q6P4F1 479 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 NCEH1Q6PIU2 408 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 FKBP9P1Q75LS8 142 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PIM3Q86V86 326 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 C1QL4Q86Z23 238 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 FAM217AQ8IXS0 508 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PEX5LQ8IYB4 626 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 STK40Q8N2I9 435 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 MIER2Q8N344 545 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 MFSD4AQ8N468 514 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TTC30BQ8N4P2 665 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 DPP10Q8N608 796 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TTC9BQ8N6N2 239 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ATAD1Q8NBU5 361 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 OR13C4Q8NGS5 318 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 OR2T34Q8NGX1 318 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 OR6P1Q8NGX9 317 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 OR2T3Q8NH03 318 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 HM13Q8TCT9 377 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ADAMTS16Q8TE57 1224 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SH3RF2Q8TEC5 729 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TRPC4APQ8TEL6 797 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 NAT14Q8WUY8 206 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TWIST2Q8WVJ9 160 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 KCNJ9Q92806 393 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 USP13Q92995 863 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 FUBP1Q96AE4 644 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 DGCR14Q96DF8 476 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 PHF21BQ96EK2 531 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SGF29Q96ES7 293 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TMA16Q96EY4 203 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 TRMT2BQ96GJ1 504 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 PLPPR2Q96GM1 343 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SLC45A3Q96JT2 553 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 MARK4Q96L34 752 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 C3orf30Q96M34 536 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 NSMCE3Q96MG7 304 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 BIRC8Q96P09 236 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 RPRD1AQ96P16 312 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 GCNAQ96QF7 691 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZNF382Q96SR6 550 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 DDX50Q9BQ39 737 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 LBHD1Q9BQE6 289 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 EFHD1Q9BUP0 239 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 MRPL9Q9BYD2 267 aaKnown RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 KRTAP4-2Q9BYR5 136 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ANKRD60Q9BZ19 345 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 GPR62Q9BZJ7 368 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ARHGAP39Q9C0H5 1083 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TUBB1Q9H4B7 451 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 COPS7BQ9H9Q2 264 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 PFDN4Q9NQP4 134 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 CCM2LQ9NUG4 571 aaPredicted RBP4.98□□□□□ -1.61
SDC2-204ENST00000519914 TBCCD1Q9NVR7 557 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 AIG1Q9NVV5 245 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 GID8Q9NWU2 228 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 TAS2R13Q9NYV9 303 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 PTTG2Q9NZH5 202 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 NUDT4Q9NZJ9 180 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ZIM2Q9NZV7 527 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 SLAMF8Q9P0V8 285 aa4.98□□□□□ -1.61
SDC2-204ENST00000519914 ACTR3BQ9P1U1 418 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms