RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 IGHV5-51A0A0C4DH38 117 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 SLC5A10A0PJK1 596 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 BHMG1C9JSJ3 638 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 CD3EAPO15446 510 aaKnown RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 AP2A2O94973 939 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 TPBGLP0DKB5 382 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 TCP1P17987 556 aaKnown RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 WT1P19544 449 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 IVDP26440 423 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 CCR7P32248 378 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 MLLT3P42568 568 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 MRPS25P82663 173 aaKnown RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 PRKG2Q13237 762 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 LAMB3Q13751 1172 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 BOP1Q14137 746 aaKnown RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 PLCL1Q15111 1095 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 ZNF789Q5FWF6 425 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 RNASEH2BQ5TBB1 312 aaKnown RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 VASH2Q86V25 355 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 PLXDC1Q8IUK5 500 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 KLHL7Q8IXQ5 586 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 LMNTD1Q8N9Z9 388 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 ELMO1Q92556 727 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 PEX13Q92968 403 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 PWWP2AQ96N64 755 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 TAAR9Q96RI9 348 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 FERD3LQ96RJ6 166 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 NAPGQ99747 312 aaPredicted RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 MAP3K3Q99759 626 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 EPB41L1Q9H4G0 881 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 KIR3DX1Q9H7L2 352 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 MRM3Q9HC36 420 aaKnown RBP12.97□□□□□ -0.33
VEGFA-219ENST00000518824 CDYLQ9Y232 598 aa12.97□□□□□ -0.33
VEGFA-219ENST00000518824 NBEAQ8NFP9 2946 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 OR6C74A6NCV1 312 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 OR5K3A6NET4 321 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 B4E171 279 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 POLR2CP19387 275 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-219ENST00000518824 ACADLP28330 430 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 TSPAN7P41732 249 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 MAGEA3P43357 314 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 CXADRP78310 365 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 MC2RQ01718 297 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 KCNAB1Q14722 419 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 MSS51Q4VC12 460 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 CACHD1Q5VU97 1274 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 RBM12BQ8IXT5 1001 aaKnown RBP12.96□□□□□ -0.33
VEGFA-219ENST00000518824 UNC5BQ8IZJ1 945 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 MCUQ8NE86 351 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 OR4E2Q8NGC2 313 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 OR5AR1Q8NGP9 310 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 TFGQ92734 400 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-219ENST00000518824 TBRG4Q969Z0 631 aaKnown RBP eCLIP12.96□□□□□ -0.337e-6■■■■■ 27.5
VEGFA-219ENST00000518824 SIGLEC10Q96LC7 697 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 BBC3Q96PG8 261 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-219ENST00000518824 TRIM51Q9BSJ1 452 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 HGH1Q9BTY7 390 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 P2RY12Q9H244 342 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 XKR8Q9H6D3 395 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 AKAP7Q9P0M2 348 aaPredicted RBP12.96□□□□□ -0.33
VEGFA-219ENST00000518824 EPHA6Q9UF33 1036 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 CIDEBQ9UHD4 219 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 ACSL6Q9UKU0 697 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 SAR1BQ9Y6B6 198 aa12.96□□□□□ -0.33
VEGFA-219ENST00000518824 GOLGA6L10A0A0M3HER8 536 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ZCWPW2A0A1B0GU75 182 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 TEX51A0A1B0GUA7 166 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 KLHL33A6NCF5 533 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 BTN3A3O00478 584 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 RASSF9O75901 435 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ANKRD34CP0C6C1 535 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 OR56A5P0C7T3 313 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ZNF28P17035 718 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 KPNA2P52292 529 aaKnown RBP12.95□□□□□ -0.34
VEGFA-219ENST00000518824 PTK6Q13882 451 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 PPP1R7Q15435 360 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ANKRD20A4Q4UJ75 823 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 CTSL3PQ5NE16 218 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ARHGAP40Q5TG30 622 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 LYPLAL1Q5VWZ2 237 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 KIAA0930Q6ICG6 404 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-219ENST00000518824 CASC4Q6P4E1 433 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 CENPUQ71F23 418 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 TIPARPQ7Z3E1 657 aaKnown RBP12.95□□□□□ -0.34
VEGFA-219ENST00000518824 DTX1Q86Y01 620 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 OR52E1Q8NGJ3 308 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 GRK7Q8WTQ7 553 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 KLHL6Q8WZ60 621 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ZNF669Q96BR6 464 aaPredicted RBP12.95□□□□□ -0.34
VEGFA-219ENST00000518824 FAM136AQ96C01 138 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ELMO2Q96JJ3 720 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 DPH1Q9BZG8 443 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 SPRY4Q9C004 299 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 RAB33BQ9H082 229 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ZNF768Q9H5H4 540 aaKnown RBP12.95□□□□□ -0.34
VEGFA-219ENST00000518824 HRASLS2Q9NWW9 162 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 GALPQ9UBC7 116 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 ASIC3Q9UHC3 531 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 PCYOX1Q9UHG3 505 aa12.95□□□□□ -0.34
VEGFA-219ENST00000518824 PLAGL1Q9UM63 463 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms