RNA–Protein interactions for RNA: ENST00000516911.1

RNU6-1258P-201, Transcript of RNA, U6 small nuclear 1258, pseudogene, humanhuman

BASIC

Gene RNU6-1258P, Length 111 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1258P-201ENST00000516911 SEMA6AQ9H2E6 1030 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PARLQ9H300 379 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 KIF9Q9HAQ2 790 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 LTB4R2Q9NPC1 389 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SMC4Q9NTJ3 1288 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 OR6C2Q9NZP2 312 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 HCN3Q9P1Z3 774 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SRP68Q9UHB9 627 aaKnown RBP0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 PLCL2Q9UPR0 1127 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 RIPK3Q9Y572 518 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 SCINQ9Y6U3 715 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 MAU2Q9Y6X3 613 aa0.78□□□□□ -2.28
RNU6-1258P-201ENST00000516911 TEX13DA0A0J9YY54 714 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 LOC101059948A0A1B0GTJ6 334 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 A0A1W2PN81 502 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF840PA6NDX5 716 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MSGN1A6NI15 193 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TCP11X1B4DZS4 312 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CDX4O14627 284 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TSPAN4O14817 238 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 OGTO15294 1046 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MAGEB4O15481 346 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 JRKO75564 520 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FOXH1O75593 365 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IGHEP01854 428 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KRT6AP02538 564 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 THY1P04216 161 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KRT6BP04259 564 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 URODP06132 367 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CYP2A7P20853 494 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HLA-FP30511 346 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CDAP32320 146 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CHRNA7P36544 502 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KRT6CP48668 564 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RPL34P49207 117 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RIPK4P57078 832 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RPS3AP61247 264 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PPIAP62937 165 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FOXO1Q12778 655 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PLA2G7Q13093 441 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RUNX3Q13761 415 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SHHQ15465 462 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 COL28A1Q2UY09 1125 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MS4A18Q3C1V0 323 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TTC31Q49AM3 519 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ATAD3CQ5T2N8 411 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 C20orf194Q5TEA3 1177 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 MARC1Q5VT66 337 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HIST2H2BDQ6DRA6 164 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 LIN54Q6MZP7 749 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CCBE1Q6UXH8 406 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KIF6Q6ZMV9 814 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 Q6ZRP5 223 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 Q75L30 129 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SUGP1Q8IWZ8 645 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FTSJ3Q8IY81 847 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 TMTC2Q8N394 836 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PLD5Q8N7P1 536 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GOLGA6L2Q8N9W4 650 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 L3MBTL4Q8NA19 623 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 EXD1Q8NHP7 514 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GSDMBQ8TAX9 411 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 AGAP11Q8TF27 550 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IGSF8Q969P0 613 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PABPC5Q96DU9 382 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 RRNAD1Q96FB5 475 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF486Q96H40 463 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF597Q96LX8 424 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KLHL15Q96M94 604 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 COG8Q96MW5 612 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NECTIN4Q96NY8 510 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NKX3-1Q99801 234 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 EBF4Q9BQW3 602 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 INTS2Q9H0H0 1204 aaKnown RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZNF700Q9H0M5 742 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PRKRIP1Q9H875 184 aaPredicted RBP0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ACKR4Q9NPB9 350 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CYTL1Q9NRR1 136 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SLC6A13Q9NSD5 602 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 HAO1Q9UJM8 370 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 STYXL1Q9Y6J8 313 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CSNK1G3Q9Y6M4 447 aa0.77□□□□□ -2.29
RNU6-1258P-201ENST00000516911 FAM237AA0A1B0GTK4 181 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GAGE10A6NGK3 116 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SNAP23O00161 211 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IPO5O00410 1097 aaKnown RBP0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 PHF1O43189 567 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 AVILO75366 819 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 SH3BGRLO75368 114 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 DFFBO76075 338 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 KCNK5O95279 499 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 IL7RP16871 459 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 BCL3P20749 454 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 LEPRP48357 1165 aaKnown RBP0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 CTCFP49711 727 aaPredicted RBP0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NEK3P51956 506 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 UFM1P61960 85 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 ZBED6P86452 979 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 NEXNQ0ZGT2 675 aa0.76□□□□□ -2.29
RNU6-1258P-201ENST00000516911 GALNT1Q10472 559 aaPredicted RBP0.76□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms