RNA–Protein interactions for RNA: ENST00000516672.1

SCARNA13-201, small Cajal body-specific RNA 13, humanhuman

BASIC

Gene SCARNA13, Length 275 nt, Biotype scaRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA13-201ENST00000516672 TUBGCP2Q9BSJ2 902 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 NT5C1AQ9BXI3 368 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 PARD6BQ9BYG5 372 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 ELOVL4Q9GZR5 314 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 NIF3L1Q9GZT8 377 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 NDST4Q9H3R1 872 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 RMI1Q9H9A7 625 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 CSNK1G1Q9HCP0 422 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 PLCB1Q9NQ66 1216 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 ARGLU1Q9NWB6 273 aaPredicted RBP3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 LIMA1Q9UHB6 759 aaKnown RBP3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 DMGDHQ9UI17 866 aaKnown RBP3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 TMEFF2Q9UIK5 374 aaPredicted RBP3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 L1RE1Q9UN81 338 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 CTNND2Q9UQB3 1225 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 ERVW-1Q9UQF0 538 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 FAT1Q14517 4588 aa3.06□□□□□ -1.92
SCARNA13-201ENST00000516672 ATP8B3O60423 1300 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC5A10A0PJK1 596 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM92AA1XBS5 289 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 BECN2A8MW95 431 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 A8MXQ7 604 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 EIF3CLB5ME19 914 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 C1QTNF3-AMACRE9PGA6 284 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SIAH2O43255 324 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 HCRTO43612 131 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC25A17O43808 307 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PLAUP00749 431 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FGF1P05230 155 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CAPN1P07384 714 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CELA2AP08217 269 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SRPRAP08240 638 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 TPM1P09493 284 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ANKRD34CP0C6C1 535 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CCDC172P0C7W6 258 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 VDRP11473 427 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 LMO2P25791 158 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PON1P27169 355 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ATP5C1P36542 298 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ARHGAP25P42331 645 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PIK3CAP42336 1068 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CTSOP43234 321 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 MTIF2P46199 727 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SEPHS1P49903 392 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CCR8P51685 355 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 NDST1P52848 882 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CACNA2D1P54289 1103 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 GSCP56915 257 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 STX17P56962 302 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC8A3P57103 927 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SNX16P57768 344 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SRP54P61011 504 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 LSM11P83369 360 aaKnown RBP eCLIP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SCGB2A2Q13296 93 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CUL2Q13617 745 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 NFATC4Q14934 902 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CNGA2Q16280 664 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 TAF9Q16594 264 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CYP2A13Q16696 494 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 DCAF17Q5H9S7 520 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FIGNQ5HY92 759 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 TEX35Q5T0J7 233 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SWT1Q5T5J6 900 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 LCE2DQ5TA82 110 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 TMCO4Q5TGY1 634 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FOXB2Q5VYV0 432 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ARHGAP17Q68EM7 881 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 KIAA1161Q6NSJ0 714 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PPP1R2P3Q6NXS1 205 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 RINLQ6ZS11 566 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 BEND5Q7L4P6 421 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 KIF18BQ86Y91 864 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SIAH3Q8IW03 269 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 FAM217AQ8IXS0 508 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 APCDD1Q8J025 514 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SCML4Q8N228 414 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 RPP25LQ8N5L8 163 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SNX31Q8N9S9 440 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ANKRD52Q8NB46 1076 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 RELL2Q8NC24 303 aaPredicted RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 MNS1Q8NEH6 495 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 OR10G6Q8NH81 332 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SCAMP5Q8TAC9 235 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ZDHHC1Q8WTX9 485 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SLC20A1Q8WUM9 679 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PATE1Q8WXA2 126 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 UBXN4Q92575 508 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SEMA4DQ92854 862 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PHF21AQ96BD5 680 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ZNF503Q96F45 646 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PIK3IP1Q96FE7 263 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 EEF2KMTQ96G04 330 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 MAP6Q96JE9 813 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 ERGIC2Q96RQ1 377 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 CDK5RAP1Q96SZ6 601 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 EIF3CQ99613 913 aaKnown RBP3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 NCAPGQ9BPX3 1015 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 SYT15Q9BQS2 421 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 PIGQQ9BRB3 760 aa3.05□□□□□ -1.92
SCARNA13-201ENST00000516672 TRIM62Q9BVG3 475 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms