RNA–Protein interactions for RNA: ENST00000515385.1

SMAD1-215, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SMAD1, Length 2,085 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-215ENST00000515385 ERVK-8P63133 956 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 PWP1Q13610 501 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 TMEM132DQ14C87 1099 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 RBM20Q5T481 1227 aaKnown RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 HECTD2Q5U5R9 776 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 SHQ1Q6PI26 577 aaKnown RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 BNIPLQ7Z465 357 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 GLRX5Q86SX6 157 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 ACOT1Q86TX2 421 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 TSPYL5Q86VY4 417 aaPredicted RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 TCTE3Q8IZS6 198 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 CLEC4CQ8WTT0 213 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 PRMT6Q96LA8 375 aaPredicted RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 CEP19Q96LK0 163 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 OR2A14Q96R47 310 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 MRPL9Q9BYD2 267 aaKnown RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 GLIS2Q9BZE0 524 aaPredicted RBP12.62□□□□□ -0.39
SMAD1-215ENST00000515385 PIF1Q9H611 641 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 SPON1Q9HCB6 807 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 ITM2CQ9NQX7 267 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 EXD2Q9NVH0 621 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 LIMD1Q9UGP4 676 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 ADGRE2Q9UHX3 823 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 GMPPBQ9Y5P6 360 aa12.62□□□□□ -0.39
SMAD1-215ENST00000515385 A0A075B6Q4 140 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 H3BQ06 376 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 CD3EAPO15446 510 aaKnown RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 CA12O43570 354 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TRIM3O75382 744 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ARHGEF15O94989 841 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 GOT2P00505 430 aaKnown RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 STAG3L1P0CL83 205 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 LCP1P13796 627 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 HOXB1P14653 301 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 HOXB8P17481 243 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 GNPDA1P46926 289 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 UFM1P61960 85 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ELP6Q0PNE2 266 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 COX10Q12887 443 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SEMA3BQ13214 749 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TBCEQ15813 527 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 AAK1Q2M2I8 961 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 PROX2Q3B8N5 592 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ARMCX4Q5H9R4 360 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 EEF1DP3Q658K8 133 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 CYP20A1Q6UW02 462 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 LYPD8Q6UX82 237 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 DLEU7Q6UYE1 221 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 CREB3L2Q70SY1 520 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SLC46A3Q7Z3Q1 461 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 NRARPQ7Z6K4 114 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 HS3ST5Q8IZT8 346 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 DEFB106AQ8N104 65 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 PTGR2Q8N8N7 351 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 APPL2Q8NEU8 664 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 OR2T12Q8NG77 320 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 NT5C3BQ969T7 300 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 NCLNQ969V3 563 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 NTAN1Q96AB6 310 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SLC30A2Q9BRI3 323 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 NIPAL2Q9H841 368 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ENTPD7Q9NQZ7 604 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 NDFIP2Q9NV92 336 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SLAMF8Q9P0V8 285 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TBC1D24Q9ULP9 559 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SNX6Q9UNH7 406 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 COL1A2P08123 1366 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 CTDSP2O14595 271 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 EGFRP00533 1210 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 PGK2P07205 417 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 RETP07949 1114 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TGFBR1P36897 503 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SERPINH1P50454 418 aaKnown RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ARHGDIAP52565 204 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 GEMP55040 296 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TPI1P60174 286 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 LCP2Q13094 533 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 MAD2L1BPQ15013 274 aaPredicted RBP12.61□□□□□ -0.39
SMAD1-215ENST00000515385 Q5BKY6 102 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ARMC4Q5T2S8 1044 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ENPP6Q6UWR7 440 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SYVN1Q86TM6 617 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TP53INP2Q8IXH6 220 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 FBXO30Q8TB52 745 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 GTF2H4Q92759 462 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 SNAPC3Q92966 411 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 OMA1Q96E52 524 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 TEX37Q96LM6 180 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ZNF583Q96ND8 569 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 FCRL5Q96RD9 977 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 PLEKHA5Q9HAU0 1116 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 C3orf14Q9HBI5 128 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 DPP3Q9NY33 737 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 B3GNT2Q9NY97 397 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 KLHL21Q9UJP4 597 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 PTGDR2Q9Y5Y4 395 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ANK1P16157 1881 aa12.61□□□□□ -0.39
SMAD1-215ENST00000515385 ARPC4-TTLL3A0A0A6YYG9 625 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 BET1O15155 118 aa12.6□□□□□ -0.39
SMAD1-215ENST00000515385 JCHAINP01591 159 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms