RNA–Protein interactions for RNA: ENST00000514830.5

PDLIM5-220, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2

Gene PDLIM5, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-220ENST00000514830 MYZAPP0CAP1 466 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 DMDP11532 3685 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC2A4P14672 509 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 EPHA8P29322 1005 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 TYK2P29597 1187 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 RGS4P49798 205 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 IL2P60568 153 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 IRX4P78413 519 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC18A2Q05940 514 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 NFE2L1Q14494 772 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 SYTL3Q4VX76 610 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 TAF1BQ53T94 588 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 PRRT3Q5FWE3 981 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 CAPRIN2Q6IMN6 1127 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 PAQR3Q6TCH7 311 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 TMEM207Q6UWW9 146 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 FAM83HQ6ZRV2 1179 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 RD3Q7Z3Z2 195 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 CLEC14AQ86T13 490 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 PDZD3Q86UT5 571 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 PIM3Q86V86 326 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 GKN2Q86XP6 184 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 CFAP206Q8IYR0 622 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 SIDT2Q8NBJ9 832 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 SAP25Q8TEE9 199 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 NAT14Q8WUY8 206 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 RUFY1Q96T51 708 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 DERL2Q9GZP9 239 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 TCEAL2Q9H3H9 227 aaPredicted RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 CAB39LQ9H9S4 337 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 GPAMQ9HCL2 828 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 DNAAF2Q9NVR5 837 aaKnown RBP11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 TBK1Q9UHD2 729 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 ACOT9Q9Y305 439 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 NCOR2Q9Y618 2525 aa11.73□□□□□ -0.53
PDLIM5-220ENST00000514830 A0A096LPK6 155 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 TLDC2A0PJX2 215 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 NEMP2A6NFY4 417 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 GOLGA6L10A6NI86 522 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 SCAMP1O15126 338 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 RGS16O15492 202 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 OPA1O60313 960 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 SASH3O75995 380 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 MT-ND3P03897 115 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 GSTA1P08263 222 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 F3P13726 295 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 ENGP17813 658 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 KRT15P19012 456 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 ACADLP28330 430 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 CCT8P50990 548 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 ATP6V0D1P61421 351 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 HSPA14Q0VDF9 509 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 BOP1Q14137 746 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 UAP1L1Q3KQV9 507 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 PLA2G4EQ3MJ16 856 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 ZNF542PQ5EBM4 170 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 OGFOD3Q6PK18 319 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 UNC5DQ6UXZ4 953 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 CYHR1Q6ZMK1 362 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 DBX2Q6ZNG2 339 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 CMC1Q7Z7K0 106 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 C17orf82Q86X59 251 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 AVL9Q8NBF6 648 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 FBXO15Q8NCQ5 510 aaPredicted RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 CCL4L1Q8NHW4 92 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 ALKBH8Q96BT7 664 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 GAREM1Q9H706 876 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 TMBIM4Q9HC24 238 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 SARS2Q9NP81 518 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 TBC1D29Q9UFV1 150 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 TLK1Q9UKI8 766 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 NOVA2Q9UNW9 492 aaKnown RBP11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 KCNK6Q9Y257 313 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 PLEKHM1Q9Y4G2 1056 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 ACACBO00763 2458 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 EPG5Q9HCE0 2579 aa11.72□□□□□ -0.53
PDLIM5-220ENST00000514830 KIR2DS5A0A0G2JLQ3 304 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 A0A0G2JNG1 304 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 A0A1W2PPM1 405 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 LNP1A1A4G5 178 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SMIM23A6NLE4 172 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 GFYI3L273 518 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 KIR2DS3K7RE56 304 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC16A5O15375 505 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 YY2O15391 372 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 PHGDHO43175 533 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 KLHL2O95198 593 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 LTA4HP09960 611 aaKnown RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC35G4P0C7Q5 338 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 GIMD1P0DJR0 217 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 BRAFP15056 766 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ITGB6P18564 788 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 XRCC1P18887 633 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 TGM1P22735 817 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 AK4P27144 223 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 PBLDP30039 288 aaPredicted RBP11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ACTR1BP42025 376 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 ACTR1AP61163 376 aa11.71□□□□□ -0.53
PDLIM5-220ENST00000514830 SLC14A1Q13336 389 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms