RNA–Protein interactions for RNA: ENST00000514305.5

USP53-208, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 2

Gene USP53, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-208ENST00000514305 LRRC61Q9BV99 259 aa19.78■□□□□ 0.76
USP53-208ENST00000514305 BOCQ9BWV1 1114 aa19.78■□□□□ 0.76
USP53-208ENST00000514305 PCDHGA10Q9Y5H3 936 aa19.78■□□□□ 0.76
USP53-208ENST00000514305 EME2A4GXA9 379 aaPredicted RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 MGAT4DA6NG13 374 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 FAM159BA6NKW6 160 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 LMO7DNF2Z398 122 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 PKMP14618 531 aaKnown RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 IDSP22304 550 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 CSE1LP55060 971 aaKnown RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 PCBP4P57723 403 aaKnown RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 B4GALNT1Q00973 533 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 C1orf61Q13536 156 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 KHDC1Q4VXA5 237 aaKnown RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 C6orf132Q5T0Z8 1188 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 LDB1Q86U70 411 aaPredicted RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 DENND6AQ8IWF6 608 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 ZNF248Q8NDW4 579 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 OR2L2Q8NH16 312 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 HM13Q8TCT9 377 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 GPBAR1Q8TDU6 330 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 LPGAT1Q92604 370 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 NAT6Q93015 286 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 FUT8Q9BYC5 575 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 TMEM168Q9H0V1 697 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 TCEAL2Q9H3H9 227 aaPredicted RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 POLR1BQ9H9Y6 1135 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 FBXO6Q9NRD1 293 aaPredicted RBP19.77■□□□□ 0.76
USP53-208ENST00000514305 ACSL5Q9ULC5 683 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 CRYL1Q9Y2S2 319 aa19.77■□□□□ 0.76
USP53-208ENST00000514305 ASXL3Q9C0F0 2248 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 FAM153BP0C7A2 387 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 ACP5P13686 325 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 CHRM3P20309 590 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 FMO4P31512 558 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 CA5AP35218 305 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 SPRP35270 261 aaPredicted RBP19.76■□□□□ 0.75
USP53-208ENST00000514305 ACTR1BP42025 376 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 CTSCP53634 463 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 ACTR1AP61163 376 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 CTBSQ01459 385 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 TMED2Q15363 201 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 FAM153CQ494X1 144 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 GRTP1Q5TC63 336 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 TAOK1Q7L7X3 1001 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 STRA8Q7Z7C7 330 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 UNC5BQ8IZJ1 945 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 CLDN19Q8N6F1 224 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 UBLCP1Q8WVY7 318 aaPredicted RBP19.76■□□□□ 0.75
USP53-208ENST00000514305 GRAMD1AQ96CP6 724 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 BBC3Q96PG8 261 aaPredicted RBP19.76■□□□□ 0.75
USP53-208ENST00000514305 P2RY12Q9H244 342 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 PRORYQ9H606 182 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 ACSS3Q9H6R3 686 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 PLAC1Q9HBJ0 212 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 KLC4Q9NSK0 619 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 LRP4O75096 1905 aa19.76■□□□□ 0.75
USP53-208ENST00000514305 OR5K4A6NMS3 321 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 LIN7AO14910 233 aaPredicted RBP19.75■□□□□ 0.75
USP53-208ENST00000514305 RIPK2O43353 540 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 OR1I1O60431 355 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 AHSGP02765 367 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 GP5P40197 560 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 SKIV2L2P42285 1042 aaKnown RBP19.75■□□□□ 0.75
USP53-208ENST00000514305 HALP42357 657 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 LSSP48449 732 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 DMPKQ09013 629 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 RPA4Q13156 261 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 BRD3Q15059 726 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 ISXQ2M1V0 245 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 TTLL9Q3SXZ7 439 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 KBTBD12Q3ZCT8 623 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 LGSNQ5TDP6 509 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 RBM44Q6ZP01 1051 aaKnown RBP19.75■□□□□ 0.75
USP53-208ENST00000514305 GSPT2Q8IYD1 628 aaKnown RBP19.75■□□□□ 0.75
USP53-208ENST00000514305 PPM1NQ8N819 430 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 AVL9Q8NBF6 648 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 WDR48Q8TAF3 677 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 ASZ1Q8WWH4 475 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 CAVIN3Q969G5 261 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 OSGEPL1Q9H4B0 414 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 PPCSQ9HAB8 311 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 SPATS2LQ9NUQ6 558 aaKnown RBP19.75■□□□□ 0.75
USP53-208ENST00000514305 KLHL42Q9P2K6 505 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 RP1P56715 2156 aa19.75■□□□□ 0.75
USP53-208ENST00000514305 COL27A1Q8IZC6 1860 aaPredicted RBP19.75■□□□□ 0.75
USP53-208ENST00000514305 YY2O15391 372 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 VPS26AO75436 327 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 TCEA3O75764 348 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 DXOO77932 396 aaKnown RBP19.74■□□□□ 0.75
USP53-208ENST00000514305 HAUS5O94927 633 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 FUCA1P04066 466 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 APOA4P06727 396 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 MYBL2P10244 700 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 SLC12A2P55011 1212 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 ERVPABLB-1P60509 514 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 MPP1Q00013 466 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 SYTL3Q4VX76 610 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 C3orf38Q5JPI3 329 aa19.74■□□□□ 0.75
USP53-208ENST00000514305 BROXQ5VW32 411 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms