RNA–Protein interactions for RNA: ENST00000513984.5

VCAN-211, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 1,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-211ENST00000513984 CDK15Q96Q40 435 aa14.66□□□□□ -0.06
VCAN-211ENST00000513984 KXD1Q9BQD3 176 aa14.66□□□□□ -0.06
VCAN-211ENST00000513984 IPPKQ9H8X2 491 aa14.66□□□□□ -0.06
VCAN-211ENST00000513984 WDR41Q9HAD4 459 aa14.66□□□□□ -0.06
VCAN-211ENST00000513984 PARVBQ9HBI1 364 aa14.66□□□□□ -0.06
VCAN-211ENST00000513984 PDE10AQ9Y233 779 aa14.66□□□□□ -0.06
VCAN-211ENST00000513984 GFYI3L273 518 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 K7EPI3 171 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 PDE5AO76074 875 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 SLCO2B1O94956 709 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 MATN4O95460 622 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 SOD1P00441 154 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 IDO1P14902 403 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 GGT5P36269 586 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 RPIAP49247 311 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 PRLHRP49683 370 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 CCNG1P51959 295 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 ADAM15Q13444 863 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 RCN1Q15293 331 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 PREPLQ4J6C6 727 aaPredicted RBP14.65□□□□□ -0.06
VCAN-211ENST00000513984 TMEM52BQ4KMG9 183 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 BNC2Q6ZN30 1099 aaPredicted RBP14.65□□□□□ -0.06
VCAN-211ENST00000513984 MYLK4Q86YV6 388 aaPredicted RBP14.65□□□□□ -0.06
VCAN-211ENST00000513984 FUNDC1Q8IVP5 155 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 TCAIMQ8N3R3 496 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 ASZ1Q8WWH4 475 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 ELMO1Q92556 727 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 SERPINI1Q99574 410 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 NPAS2Q99743 824 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 MRPL1Q9BYD6 325 aaKnown RBP14.65□□□□□ -0.06
VCAN-211ENST00000513984 S1PR5Q9H228 398 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 PRSS16Q9NQE7 514 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 SDR39U1Q9NRG7 319 aaPredicted RBP14.65□□□□□ -0.06
VCAN-211ENST00000513984 RIC8BQ9NVN3 520 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 TRPM6Q9BX84 2022 aa14.65□□□□□ -0.06
VCAN-211ENST00000513984 OR2AG2A6NM03 316 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 C1QTNF3-AMACRE9PGA6 284 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 FBP2O00757 339 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 CAPN1P07384 714 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 LAMP2P13473 410 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 GRIA2P42262 883 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 PIK3CGP48736 1102 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 KIF19Q2TAC6 998 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ZNF648Q5T619 568 aaPredicted RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 WLSQ5T9L3 541 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 REP15Q6BDI9 236 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 CES5AQ6NT32 575 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 PAOXQ6QHF9 649 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 MBOAT1Q6ZNC8 495 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 RNF165Q6ZSG1 346 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ERN2Q76MJ5 926 aaKnown RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 HPS6Q86YV9 775 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 HOMEZQ8IX15 550 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 MIER2Q8N344 545 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 DCBLD1Q8N8Z6 715 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 RASGEF1AQ8N9B8 481 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 OR9I1Q8NGQ6 314 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 OR2T11Q8NH01 316 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 METTL6Q8TCB7 284 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 FGF14Q92915 247 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ATP6V1E2Q96A05 226 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 NUS1Q96E22 293 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ACOX2Q99424 681 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 NTMT1Q9BV86 223 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 TRIM54Q9BYV2 358 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 DYRK4Q9NR20 520 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ARL15Q9NXU5 204 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 CACNA2D2Q9NY47 1150 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 CLEC1BQ9P126 229 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 STX18Q9P2W9 335 aaKnown RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 POMPQ9Y244 141 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ANGPTL3Q9Y5C1 460 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 BBIP1A8MTZ0 92 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ARNTLO00327 626 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 STK16O75716 305 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 RECQL5O94762 991 aaPredicted RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 SORBS2O94875 1100 aaKnown RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 ANP32DO95626 131 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 C6P13671 934 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 GDI1P31150 447 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 GDF5P43026 501 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 CTSCP53634 463 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 DPTQ07507 201 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 TMEM115Q12893 351 aaPredicted RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 GRIK2Q13002 908 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ENPP2Q13822 863 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 LRP8Q14114 963 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 ITPRIPL2Q3MIP1 535 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 PIGGQ5H8A4 983 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 TCHHL1Q5QJ38 904 aaPredicted RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 EGFLAMQ63HQ2 1017 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 PARM1Q6UWI2 310 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 HACD2Q6Y1H2 254 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 MILR1Q7Z6M3 343 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 MMAAQ8IVH4 418 aaKnown RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 BEND7Q8N7W2 519 aaPredicted RBP14.64□□□□□ -0.07
VCAN-211ENST00000513984 JADE3Q92613 823 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 RAB7BQ96AH8 199 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 HDAC8Q9BY41 377 aa14.64□□□□□ -0.07
VCAN-211ENST00000513984 EPHX3Q9H6B9 360 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms