RNA–Protein interactions for RNA: ENST00000513016.5

VCAN-209, Transcript of versican, humanhuman

TSL 1 (best)

Gene VCAN, Length 8,483 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-209ENST00000513016 RPL7AP62424 266 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 RPS24P62847 133 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 ZNF33AQ06730 810 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 NR0B2Q15466 257 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 C16orf46Q6P387 395 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 POMZP3Q6PJE2 187 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 RNF19BQ6ZMZ0 732 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 CLEC20AQ6ZU45 233 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 Q6ZVU0 165 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 TAS1R3Q7RTX0 852 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 DEFB119Q8N690 84 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 FAM13CQ8NE31 585 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 PIWIL2Q8TC59 973 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 ZSWIM3Q96MP5 696 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 KREMEN1Q96MU8 473 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ATG10Q9H0Y0 220 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 ACTL8Q9H568 366 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 NOL6Q9H6R4 1146 aaKnown RBP4.19□□□□□ -1.74
VCAN-209ENST00000513016 IPPKQ9H8X2 491 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 SAR1AQ9NR31 198 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 OSER1Q9NX31 292 aa4.19□□□□□ -1.74
VCAN-209ENST00000513016 YJEFN3A6XGL0 299 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MMP20O60882 483 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SEMA4FO95754 770 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 GOT2P00505 430 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 ZNF8P17098 575 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 CD247P20963 164 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CXCR1P25024 350 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DPY19L1Q2PZI1 675 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PRRT3Q5FWE3 981 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CDCA2Q69YH5 1023 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 KIAA0930Q6ICG6 404 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 CIR1Q86X95 450 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 OR5L2Q8NGL0 311 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TFGQ92734 400 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 RORBQ92753 470 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MYDGFQ969H8 173 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CAMK1GQ96NX5 476 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 HOPXQ9BPY8 73 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 HERPUD2Q9BSE4 406 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MVB12BQ9H7P6 319 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PTPRHQ9HD43 1115 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 HMG20AQ9NP66 347 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PRODH2Q9UF12 536 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 C3orf18Q9UK00 162 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TRAF6Q9Y4K3 522 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PARP4Q9UKK3 1724 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 C2CD4BA6NLJ0 364 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 FAM170BA6NMN3 283 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 RIIAD1A6NNX1 92 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 SCDO00767 359 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ALOX15BO15296 676 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CLOCKO15516 846 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 OAS1P00973 400 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 ATP1B2P14415 290 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 PSMB9P28065 219 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 RABGGTBP53611 331 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ARSFP54793 590 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 KCNJ2P63252 427 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PLP2Q04941 152 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DMPKQ09013 629 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DECR1Q16698 335 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 ZNF311Q5JNZ3 666 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MORN1Q5T089 497 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DEF8Q6ZN54 512 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 RASSF6Q6ZTQ3 369 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 APLFQ8IW19 511 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 DCUN1D3Q8IWE4 304 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PLD5Q8N7P1 536 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 NOA1Q8NC60 698 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 ZNF75CPQ92670 426 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 USP29Q9HBJ7 922 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 EPHA6Q9UF33 1036 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MAGEL2Q9UJ55 1249 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MCM8Q9UJA3 840 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 HCN2Q9UL51 889 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PRKAB1Q9Y478 270 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 KCPQ6ZWJ8 1503 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 K7EPI3 171 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 UROSP10746 265 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CHN2P52757 468 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 MLLT6P55198 1093 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 RING1Q06587 406 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 DSC1Q08554 894 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 GTF2H2Q13888 395 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 KPNB1Q14974 876 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 PDZK1Q5T2W1 519 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 GTF2H2CQ6P1K8 395 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 TMPRSS11AQ6ZMR5 421 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 RBM12BQ8IXT5 1001 aaKnown RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 IZUMO1Q8IYV9 350 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 C12orf76Q8N812 135 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 ANKFN1Q8N957 763 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 PIGXQ8TBF5 258 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 NAT6Q93015 286 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 CPNE2Q96FN4 548 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 PGM2Q96G03 612 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 OXNAD1Q96HP4 312 aaPredicted RBP4.18□□□□□ -1.74
VCAN-209ENST00000513016 PRRX2Q99811 253 aa4.18□□□□□ -1.74
VCAN-209ENST00000513016 BATF3Q9NR55 127 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms