RNA–Protein interactions for RNA: ENST00000511628.1

CHD1-207, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 3

Gene CHD1, Length 599 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-207ENST00000511628 BCCIPQ9P287 314 aaKnown RBP eCLIP3.06□□□□□ -1.92
CHD1-207ENST00000511628 FAF1Q9UNN5 650 aaPredicted RBP3.06□□□□□ -1.92
CHD1-207ENST00000511628 TCF19Q9Y242 345 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 CCL27Q9Y4X3 112 aa3.06□□□□□ -1.92
CHD1-207ENST00000511628 PRAG1Q86YV5 1406 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ASTN2O75129 1339 aaPredicted RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 PTPRCP08575 1304 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 A0A1W2PS18 150 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 TCRBV21S2A2A0A5A6 115 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 OR2M5A3KFT3 312 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ASPDHA6ND91 283 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 TMEM178BH3BS89 294 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 TO15178 435 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 NDUFS4O43181 175 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CGAP01215 116 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 NR2F2P24468 414 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ARSEP51690 589 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 EEF1A1P68104 462 aaKnown RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 ROR1Q01973 937 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 KRT33BQ14525 404 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 MELKQ14680 651 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 SNAPC1Q16533 368 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 MRGPRG-AS1Q2M3A8 158 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ALDH1L2Q3SY69 923 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CRY2Q49AN0 593 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CBWD6Q4V339 395 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CBWD3Q5JTY5 395 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 C1QTNF12Q5T7M4 302 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 EEF1A1P5Q5VTE0 462 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 DHRS7BQ6IAN0 325 aaPredicted RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 TRNP1Q6NT89 227 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ADAM5Q6NVV9 412 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 FBXL22Q6P050 247 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ZNF449Q6P9G9 518 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 FIGLAQ6QHK4 219 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 IL27RAQ6UWB1 636 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 KCTD8Q6ZWB6 473 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 GPR180Q86V85 440 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 VSIG1Q86XK7 387 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 MAP7D3Q8IWC1 876 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 GCSAMQ8N6F7 178 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CNBD1Q8NA66 436 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 KBTBD3Q8NAB2 608 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 XXYLT1Q8NBI6 393 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 OR52I2Q8NH67 350 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 LNX1Q8TBB1 728 aaPredicted RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 ABTB1Q969K4 478 aaPredicted RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 MOAP1Q96BY2 351 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 RMDN1Q96DB5 314 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ZNF582Q96NG8 517 aaPredicted RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 SYT17Q9BSW7 474 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 SEMA6AQ9H2E6 1030 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 SLA2Q9H6Q3 261 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CNOT10Q9H9A5 744 aaKnown RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 FKRPQ9H9S5 495 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 UPF2Q9HAU5 1272 aaKnown RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 PCDH9Q9HC56 1237 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 CHMP1AQ9HD42 196 aaPredicted RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 MRGBPQ9NV56 204 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 AMACRQ9UHK6 382 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 RALYQ9UKM9 306 aaKnown RBP3.05□□□□□ -1.92
CHD1-207ENST00000511628 OR2W1Q9Y3N9 320 aa3.05□□□□□ -1.92
CHD1-207ENST00000511628 ZNF541Q9H0D2 1346 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 GREB1LQ9C091 1923 aaPredicted RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 C5orf60A6NFR6 353 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 ZBTB43O43298 467 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 CELF2O95319 508 aaKnown RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 GCNT3O95395 438 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 TRUB2O95900 331 aaKnown RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 HLA-DOBP13765 273 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 ITGA2P17301 1181 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 CYP11B2P19099 503 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 ZNF41P51814 821 aaPredicted RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 CSE1LP55060 971 aaKnown RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 SIRPAP78324 504 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 ILF3Q12906 894 aaKnown RBP eCLIP3.04□□□□□ -1.92
CHD1-207ENST00000511628 RALGDSQ12967 914 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 KRTAP24-1Q3LI83 254 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 TMEM35AQ53FP2 167 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 KLHL26Q53HC5 615 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 TCP11X2Q5H9J9 407 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 C19orf48Q6RUI8 117 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 SUSD1Q6UWL2 747 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 GFRALQ6UXV0 394 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 SLFN11Q7Z7L1 901 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 SMIM29Q86T20 159 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 TMEM219Q86XT9 240 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 SLC5A8Q8N695 610 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 OR2AJ1Q8NGZ0 328 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 THAP6Q8TBB0 222 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 MRPS27Q92552 414 aaKnown RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 PIGTQ969N2 578 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 NXNL1Q96CM4 212 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 PRMT6Q96LA8 375 aaPredicted RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 FER1L6-AS2Q96M78 137 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 QRFPRQ96P65 431 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 NAA11Q9BSU3 229 aaPredicted RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 ABHD6Q9BV23 337 aa3.04□□□□□ -1.92
CHD1-207ENST00000511628 TRMT61BQ9BVS5 477 aaKnown RBP3.04□□□□□ -1.92
CHD1-207ENST00000511628 TBC1D17Q9HA65 648 aa3.04□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms