RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 CCDC188H7C350 402 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 QSOX1O00391 747 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 IFRD1O00458 451 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 PRMT5O14744 637 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 HGSO14964 777 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 KIF1CO43896 1103 aaKnown RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 PRAMEF10O60809 474 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 FGF3P11487 239 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 PAMP19021 973 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 ITPKBP27987 946 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 FMO4P31512 558 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 SLC5A2P31639 672 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 CCR7P32248 378 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 CSTF2P33240 577 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX41-212ENST00000511040 EIF2S3P41091 472 aaKnown RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 CAPZBP47756 277 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 EIF3BP55884 814 aaKnown RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 PCBP4P57723 403 aaKnown RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 ERVPABLB-1P60509 514 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 PRKG2Q13237 762 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 TRA2AQ13595 282 aaKnown RBP eCLIP13.63□□□□□ -0.23
DDX41-212ENST00000511040 MSS51Q4VC12 460 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 HP1BP3Q5SSJ5 553 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 NEPROQ6NW34 567 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 IGF2-ASQ6U949 168 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 FAM92BQ6ZTR7 304 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 SYDE1Q6ZW31 735 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 PLXDC1Q8IUK5 500 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 AGBL5Q8NDL9 886 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 TMEM159Q96B96 161 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 STAMBPL1Q96FJ0 436 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 SIGLEC10Q96LC7 697 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 C16orf45Q96MC5 204 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 HGH1Q9BTY7 390 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 WDR70Q9NW82 654 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 FOXJ2Q9P0K8 574 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 COLEC10Q9Y6Z7 277 aa13.63□□□□□ -0.23
DDX41-212ENST00000511040 MN1Q10571 1320 aaPredicted RBP13.63□□□□□ -0.23
DDX41-212ENST00000511040 ZCWPW2A0A1B0GU75 182 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 SLC5A10A0PJK1 596 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 MAGEB16A2A368 324 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 BHMG1C9JSJ3 638 aaPredicted RBP13.62□□□□□ -0.23
DDX41-212ENST00000511040 LIN7AO14910 233 aaPredicted RBP13.62□□□□□ -0.23
DDX41-212ENST00000511040 GSTM1P09488 218 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 SEPHS1P49903 392 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 GSTM4Q03013 218 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 DHX9Q08211 1270 aaKnown RBP13.62□□□□□ -0.23
DDX41-212ENST00000511040 RPA4Q13156 261 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 BBS9Q3SYG4 887 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 MRNIPQ6NTE8 343 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 ARHGAP22Q7Z5H3 698 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 PCGF5Q86SE9 256 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 SDCCAG8Q86SQ7 713 aaPredicted RBP13.62□□□□□ -0.23
DDX41-212ENST00000511040 CLEC14AQ86T13 490 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 PDZD3Q86UT5 571 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 VRK3Q8IV63 474 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 UNC5BQ8IZJ1 945 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 OR4E2Q8NGC2 313 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 TFGQ92734 400 aaPredicted RBP13.62□□□□□ -0.23
DDX41-212ENST00000511040 ART4Q93070 314 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 FAM136AQ96C01 138 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 C9orf72Q96LT7 481 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 P2RY12Q9H244 342 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 KIR3DX1Q9H7L2 352 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 GNPTGQ9UJJ9 305 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 CRYL1Q9Y2S2 319 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 HEBP2Q9Y5Z4 205 aa13.62□□□□□ -0.23
DDX41-212ENST00000511040 OR6C74A6NCV1 312 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 C9orf172C9J069 976 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 F8W8V4 182 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 RRP8O43159 456 aaKnown RBP13.61□□□□□ -0.23
DDX41-212ENST00000511040 RASSF9O75901 435 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 C9P02748 559 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 NDUFS1P28331 727 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 MLLT3P42568 568 aaPredicted RBP13.61□□□□□ -0.23
DDX41-212ENST00000511040 CD151P48509 253 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 ITGA8P53708 1063 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 HSPA14Q0VDF9 509 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 THOC5Q13769 683 aaKnown RBP13.61□□□□□ -0.23
DDX41-212ENST00000511040 MORF4L2Q15014 288 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 TYSND1Q2T9J0 566 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 DNAJC21Q5F1R6 531 aaKnown RBP13.61□□□□□ -0.23
DDX41-212ENST00000511040 ZNF789Q5FWF6 425 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 CTSL3PQ5NE16 218 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 CACHD1Q5VU97 1274 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 ZNF470Q6ECI4 717 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 LRRC69Q6ZNQ3 347 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 CENPUQ71F23 418 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 TMEM135Q86UB9 458 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 HOOK3Q86VS8 718 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 ZFAND4Q86XD8 727 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 IGDCC3Q8IVU1 814 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 DENND6AQ8IWF6 608 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 SPACA3Q8IXA5 215 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 ZNF248Q8NDW4 579 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 ACVR1CQ8NER5 493 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 SPATA4Q8NEY3 305 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 OR5AR1Q8NGP9 310 aa13.61□□□□□ -0.23
DDX41-212ENST00000511040 KCNE4Q8WWG9 221 aa13.61□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms