RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 LNPEPQ9UIQ6 1025 aa14.44□□□□□ -0.1
UBE2D3-228ENST00000508974 HEATR9A2RTY3 570 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 KLHL33A6NCF5 533 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 ERI2A8K979 691 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 CEP104O60308 925 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 DLGAP3O95886 979 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 GOT2P00505 430 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 EBLN1P0CF75 366 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 FOLR1P15328 257 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 NELFEP18615 380 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 POLR2CP19387 275 aaPredicted RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 MAP4P27816 1152 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 FOXN2P32314 431 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 RPL22P35268 128 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 KCNJ1P48048 391 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 BASP1P80723 227 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 TUBB3Q13509 450 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 SEMA5AQ13591 1074 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 TBR1Q16650 682 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 CAPRIN2Q6IMN6 1127 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 GALNT6Q8NCL4 622 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 OR13J1Q8NGT2 312 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 KLHL6Q8WZ60 621 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 HDAC10Q969S8 669 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 WBP1Q96G27 269 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 C19orf43Q9BQ61 176 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 HGH1Q9BTY7 390 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 SLC12A9Q9BXP2 914 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 TLR10Q9BXR5 811 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 RAB33BQ9H082 229 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 VPS37BQ9H9H4 285 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 PAK5Q9P286 719 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 IL17BQ9UHF5 180 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 PPP2R2CQ9Y2T4 447 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 TMEM184BQ9Y519 407 aaPredicted RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 MRPS18BQ9Y676 258 aaKnown RBP14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 COLEC10Q9Y6Z7 277 aa14.43□□□□□ -0.1
UBE2D3-228ENST00000508974 BOD1L1Q8NFC6 3051 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 C17orf113A0A1B0GUU1 675 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 GSAPA4D1B5 854 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 IFRD1O00458 451 aaPredicted RBP14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 OR1I1O60431 355 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 SUN1O94901 812 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 TIAF1O95411 115 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 ITGB6P18564 788 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 KPNA2P52292 529 aaKnown RBP14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 CSE1LP55060 971 aaKnown RBP14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 SESN2P58004 480 aaPredicted RBP14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 CRADDP78560 199 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 PRKG2Q13237 762 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 BOP1Q14137 746 aaKnown RBP14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 CCNG2Q16589 344 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 TSTD2Q5T7W7 516 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 ATP1A1-AS1Q5TC04 95 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 ZNF605Q86T29 641 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 PPP1R3BQ86XI6 285 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 PPHLN1Q8NEY8 458 aaKnown RBP14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 TRIM58Q8NG06 486 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 OR6P1Q8NGX9 317 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 LCN9Q8WX39 176 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 ELMO1Q92556 727 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 UBXN4Q92575 508 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 STAMBPL1Q96FJ0 436 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 MED8Q96G25 268 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 OR52A5Q9H2C5 316 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 XKR8Q9H6D3 395 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 CASS4Q9NQ75 786 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 SOHLH2Q9NX45 425 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 HEBP2Q9Y5Z4 205 aa14.42□□□□□ -0.1
UBE2D3-228ENST00000508974 TLCD2A6NGC4 264 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 NKX2-8O15522 239 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 NRDCO43847 1150 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 SPAG6O75602 509 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ITGB2P05107 769 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ADRA1DP25100 572 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 NDUFS1P28331 727 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 STAT5AP42229 794 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 NSG1P42857 185 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 PRAMEP78395 509 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ABHD18Q0P651 414 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 PRKAA1Q13131 559 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 SEMA3AQ14563 771 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 IL11RAQ14626 422 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 TRIP13Q15645 432 aaPredicted RBP14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 GPR19Q15760 415 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ZNF658BQ4V348 819 aaPredicted RBP14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 SYTL3Q4VX76 610 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 C16orf46Q6P387 395 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ZNF449Q6P9G9 518 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 AFTPHQ6ULP2 937 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 C6orf15Q6UXA7 325 aaPredicted RBP14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ZNF662Q6ZS27 426 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 LDB1Q86U70 411 aaPredicted RBP14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ESX1Q8N693 406 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 ACVR1CQ8NER5 493 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 OR52E1Q8NGJ3 308 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 SLC41A2Q96JW4 573 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 KLHL25Q9H0H3 589 aa14.41□□□□□ -0.1
UBE2D3-228ENST00000508974 SRMSQ9H3Y6 488 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms