RNA–Protein interactions for RNA: ENST00000507533.1

DDR1-260, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 2

Gene DDR1, Length 545 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-260ENST00000507533 AIMP2Q13155 320 aaKnown RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 GALNT3Q14435 633 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 ASIC2Q16515 512 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 FCRL6Q6DN72 434 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 TIGD7Q6NT04 549 aaPredicted RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 IGFL2Q6UWQ7 119 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 IRF2BP2Q7Z5L9 587 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 TMC3Q7Z5M5 1100 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 PPP1R32Q7Z5V6 425 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 CDH24Q86UP0 819 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 ZNF808Q8N4W9 903 aaPredicted RBP13.48□□□□□ -0.25
DDR1-260ENST00000507533 BCORP1Q8N888 145 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 CCDC120Q96HB5 630 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 TTC25Q96NG3 672 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 C1GALT1Q9NS00 363 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 AIPL1Q9NZN9 384 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 SLC24A2Q9UI40 661 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 CAPN11Q9UMQ6 739 aa13.48□□□□□ -0.25
DDR1-260ENST00000507533 NIPBLQ6KC79 2804 aaeCLIP13.47□□□□□ -0.25
DDR1-260ENST00000507533 MAP3K7O43318 606 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 MMP2P08253 660 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 CD63P08962 238 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 MSL3P1P0C860 447 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 RARAP10276 462 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 TCF4P15884 667 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 CAPN3P20807 821 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 ZBED6P86452 979 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 GALNT2Q10471 571 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 PRKAA1Q13131 559 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 NFE2L1Q14494 772 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 C1orf189Q5VU69 101 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 AGAP7PQ5VUJ5 663 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 DUS1LQ6P1R4 473 aaKnown RBP13.47□□□□□ -0.25
DDR1-260ENST00000507533 VSTM4Q8IW00 320 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 OR2Y1Q8NGV0 311 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 CPLX3Q8WVH0 158 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 ZFPM2Q8WW38 1151 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 PTERQ96BW5 349 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 HDAC11Q96DB2 347 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 AGAP4Q96P64 663 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 VPS35Q96QK1 796 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 INSM2Q96T92 566 aaPredicted RBP13.47□□□□□ -0.25
DDR1-260ENST00000507533 GPR63Q9BZJ6 419 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 TRIM5Q9C035 493 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 PCDH18Q9HCL0 1135 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 POMT2Q9UKY4 750 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 PCNX1Q96RV3 2341 aa13.47□□□□□ -0.25
DDR1-260ENST00000507533 TRGV8A0A0C4DH27 118 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 CCDC78A2IDD5 438 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 AGPSO00116 658 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 MFSD11O43934 449 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 GYPCP04921 128 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 HLA-DPA1P20036 260 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 CCNCP24863 283 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 PRKCIP41743 596 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 LMAN1P49257 510 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 FOXL2P58012 376 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 TLR1Q15399 786 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 IFI16Q16666 785 aaKnown RBP13.46□□□□□ -0.25
DDR1-260ENST00000507533 ATP13A5Q4VNC0 1218 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 CCDC122Q5T0U0 273 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 E4F1Q66K89 784 aaPredicted RBP13.46□□□□□ -0.25
DDR1-260ENST00000507533 PPP1R2P3Q6NXS1 205 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 OR4E2Q8NGC2 313 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 BRSK1Q8TDC3 778 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 LRRN4Q8WUT4 740 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 SYN2Q92777 582 aaPredicted RBP13.46□□□□□ -0.25
DDR1-260ENST00000507533 FATE1Q969F0 183 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 C12orf66Q96MD2 445 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 WWP1Q9H0M0 922 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 KIR3DX1Q9H7L2 352 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 MAGEE1Q9HCI5 957 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 IFT80Q9P2H3 777 aaPredicted RBP13.46□□□□□ -0.25
DDR1-260ENST00000507533 NDOR1Q9UHB4 597 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 LUC7L2Q9Y383 392 aaKnown RBP13.46□□□□□ -0.25
DDR1-260ENST00000507533 ZNF711Q9Y462 761 aa13.46□□□□□ -0.25
DDR1-260ENST00000507533 MDC1Q14676 2089 aaKnown RBP13.46□□□□□ -0.26
DDR1-260ENST00000507533 A0A1B0GTL3 188 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 CCDC66A2RUB6 948 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 GSAPA4D1B5 854 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 CCL21O00585 134 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 PCDH17O14917 1159 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 UMODP07911 640 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 ST6GAL1P15907 406 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 HOXB4P17483 251 aaPredicted RBP13.45□□□□□ -0.26
DDR1-260ENST00000507533 CTSCP53634 463 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 DCDP81605 110 aaKnown RBP13.45□□□□□ -0.26
DDR1-260ENST00000507533 MMRN1Q13201 1228 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 TRIM14Q14142 442 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 KRT81Q14533 505 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 SLC9A5Q14940 896 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 PRKD1Q15139 912 aaPredicted RBP13.45□□□□□ -0.26
DDR1-260ENST00000507533 IRAK1BP1Q5VVH5 260 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 PRAMEF13Q5VWM6 474 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 METRNLQ641Q3 311 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 TXNRD3NBQ6F5E7 133 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 RPUSD3Q6P087 351 aaKnown RBP13.45□□□□□ -0.26
DDR1-260ENST00000507533 MTFR2Q6P444 385 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 TMEM220Q6QAJ8 160 aa13.45□□□□□ -0.26
DDR1-260ENST00000507533 RPTNQ6XPR3 784 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms