RNA–Protein interactions for RNA: ENST00000507326.2

HMGB3P15-201, Transcript of high mobility group box 3 pseudogene 15, humanhuman

BASIC

Gene HMGB3P15, Length 574 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P15-201ENST00000507326 LRRIQ3A6PVS8 624 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 YDJCA8MPS7 323 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 KDM4EB2RXH2 506 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TBC1D3LB9A6J9 549 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 F8WDY8 70 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 F2RL2O00254 374 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TRDMT1O14717 391 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PPEF2O14830 753 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SYN3O14994 580 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SLC25A12O75746 678 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 AKAP3O75969 853 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 OR6B1O95007 311 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 NXPH3O95157 252 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 NTN1O95631 604 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 DDAH2O95865 285 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TRUB2O95900 331 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PDGFBP01127 241 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 GH1P01241 217 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TBC1D3HP0C7X1 549 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TROVE2P10155 538 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PRKACAP17612 351 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CEBPBP17676 345 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ITGALP20701 1170 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 U2AF2P26368 475 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 KLRC2P26717 231 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ANXA13P27216 316 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 POU1F1P28069 291 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 NMT1P30419 496 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 MC5RP33032 325 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 HNF1BP35680 557 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PBX3P40426 434 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 GSTM5P46439 218 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SLC11A2P49281 568 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CEBPDP49716 269 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CAMPP49913 170 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF135P52742 658 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SUCLG1P53597 346 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SSTP61278 116 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 YWHAGP61981 247 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 GALK2Q01415 458 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TNFRSF17Q02223 184 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 OLIG2Q13516 323 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 IL11RAQ14626 422 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CHRNA6Q15825 494 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SNCBQ16143 134 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PLEKHO1Q53GL0 409 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 LIN9Q5TKA1 542 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CACHD1Q5VU97 1274 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM91A1Q658Y4 838 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TBC1D3GQ6DHY5 549 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SNRNP48Q6IEG0 339 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 OR7E24Q6IFN5 339 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TBC1D3CQ6IPX1 549 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 NOTUMQ6P988 496 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CLEC2AQ6UVW9 174 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 LAYNQ6UX15 382 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CLEC9AQ6UXN8 241 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 MACC1Q6ZN28 852 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF410Q86VK4 478 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CAND1Q86VP6 1230 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ARID3BQ8IVW6 561 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 FOXRED2Q8IWF2 684 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CD302Q8IX05 232 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 HACE1Q8IYU2 909 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TBC1D3Q8IZP1 549 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CENPLQ8N0S6 344 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 UBE2J2Q8N2K1 259 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 COMMD1Q8N668 190 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 DDX51Q8N8A6 666 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ENDOVQ8N8Q3 282 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 KDM1BQ8NB78 822 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 STEAP2Q8NFT2 490 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 GRAPLQ8TC17 118 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PAQR8Q8TEZ7 354 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PSPC1Q8WXF1 523 aaKnown RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 MCUR1Q96AQ8 359 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 MIB2Q96AX9 1013 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ARSGQ96EG1 525 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 CCDC51Q96ER9 411 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 HMCESQ96FZ2 354 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PGM2Q96G03 612 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAR2Q96K12 515 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 KLHL15Q96M94 604 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ZNF560Q96MR9 790 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 PRICKLE1Q96MT3 831 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 FAM213AQ9BRX8 229 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 WACQ9BTA9 647 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 FICDQ9BVA6 458 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 STRA6Q9BX79 667 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 OSBPL10Q9BXB5 764 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SPRTNQ9H040 489 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 TMEM117Q9H0C3 514 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ECT2Q9H8V3 914 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 KIF9Q9HAQ2 790 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SCPEP1Q9HB40 452 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SEMA4BQ9NPR2 832 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 XPNPEP3Q9NQH7 507 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 SMPD3Q9NY59 655 aaPredicted RBP3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 ELOVL5Q9NYP7 299 aa3.56□□□□□ -1.84
HMGB3P15-201ENST00000507326 STX18Q9P2W9 335 aaKnown RBP3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms