RNA–Protein interactions for RNA: ENST00000507004.1

HMGCS1-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 950 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-203ENST00000507004 CROTQ9UKG9 612 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 BTRCQ9Y297 605 aa14.07□□□□□ -0.16
HMGCS1-203ENST00000507004 TLN1Q9Y490 2541 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 GCN1Q92616 2671 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 IGHV5-51A0A0C4DH38 117 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 TERTO14746 1132 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 CPNE3O75131 537 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 AP2A1O95782 977 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 MSL3P1P0C860 447 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 PRKAR1AP10644 381 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 ACRV1P26436 265 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 OAS2P29728 719 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 CDC25BP30305 580 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 NSG1P42857 185 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 RPS15P62841 145 aaKnown RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 KLF1Q13351 362 aaPredicted RBP14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 DNASE1L3Q13609 305 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 PTPRCAPQ14761 206 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 ZRANB3Q5FWF4 1079 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 LYPLAL1Q5VWZ2 237 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 C16orf46Q6P387 395 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 UNC5BQ8IZJ1 945 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 ACRBPQ8NEB7 543 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 COG4Q9H9E3 785 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 KCND1Q9NSA2 647 aa14.06□□□□□ -0.16
HMGCS1-203ENST00000507004 ATMQ13315 3056 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 OR6C74A6NCV1 312 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 MKRN2OSH3BPM6 223 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 LIN7AO14910 233 aaPredicted RBP14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 SGTAO43765 313 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 CREG1O75629 220 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 FTH1P02794 183 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 POLBP06746 335 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 KLK3P07288 261 aaPredicted RBP14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 ZNF28P17035 718 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 PSMA3P25788 255 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 CA5AP35218 305 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 PPARGP37231 505 aaPredicted RBP14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 FDFT1P37268 417 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 GSDMDP57764 484 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 DEFB109BQ30KR1 87 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 SEL1L2Q5TEA6 688 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 NLRP9Q7RTR0 991 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 SERPINA9Q86WD7 417 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 FAM71DQ8N9W8 422 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 LCN9Q8WX39 176 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 THAP4Q8WY91 577 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 PEX13Q92968 403 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 CDKN2AIPNLQ96HQ2 116 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 HES6Q96HZ4 224 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 DNAJC1Q96KC8 554 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 RMDN2Q96LZ7 410 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 SRMSQ9H3Y6 488 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 TFB2MQ9H5Q4 396 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 POMT2Q9UKY4 750 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 RIMKLBQ9ULI2 386 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 CFAP20Q9Y6A4 193 aaKnown RBP14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 CFAP46Q8IYW2 2715 aa14.05□□□□□ -0.16
HMGCS1-203ENST00000507004 DDX3YO15523 660 aaKnown RBP14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 KRT86O43790 486 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 KATNA1O75449 491 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 FOLR1P15328 257 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 CDH3P22223 829 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 TMPRSS15P98073 1019 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 CDH17Q12864 832 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 LACTB2Q53H82 288 aaPredicted RBP14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 PWWP2BQ6NUJ5 590 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 CERS6Q6ZMG9 384 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 TAS2R42Q7RTR8 314 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 SYVN1Q86TM6 617 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 CPT1BQ92523 772 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 ELMO2Q96JJ3 720 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 FERD3LQ96RJ6 166 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 FAM118BQ9BPY3 351 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 SOHLH2Q9NX45 425 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 KCNMB2Q9Y691 235 aa14.04□□□□□ -0.16
HMGCS1-203ENST00000507004 HEATR9A2RTY3 570 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 C2orf74A8MZ97 194 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 AP3B1O00203 1094 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 SCRG1O75711 98 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 METTL18O95568 372 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 HBQ1P09105 142 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 EBLN1P0CF75 366 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 CASRP41180 1078 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 OLIG2Q13516 323 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 SPARCL1Q14515 664 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 POU6F1Q14863 301 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 TCTN3Q6NUS6 607 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 AADACL2Q6P093 401 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 C4orf22Q6V702 233 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 PACS1Q6VY07 963 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 HOOK3Q86VS8 718 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 TMEM126BQ8IUX1 230 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 APLFQ8IW19 511 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 DNAAF3Q8N9W5 541 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 SPDYE1Q8NFV5 336 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 OR4E2Q8NGC2 313 aa14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 TFGQ92734 400 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 ZNF501Q96CX3 271 aaPredicted RBP14.03□□□□□ -0.16
HMGCS1-203ENST00000507004 C17orf62Q9BQA9 187 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms