RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 VPS26AO75436 327 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 FAM155BO75949 473 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 MYF5P13349 255 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 FDXRP22570 491 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 ACP1P24666 158 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 ACADLP28330 430 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SPRP35270 261 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SKIV2L2P42285 1042 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 HALP42357 657 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 RPIAP49247 311 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 LIMK2P53671 638 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 MAZP56270 477 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 UBE2IP63279 158 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 HSPA14Q0VDF9 509 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 BRD3Q15059 726 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 NR0B2Q15466 257 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 RPE65Q16518 533 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 KLHL38Q2WGJ6 581 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SYTL3Q4VX76 610 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 CHCHD2P9Q5T1J5 151 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 UGT3A1Q6NUS8 523 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SLC9B2Q86UD5 537 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 PDZD3Q86UT5 571 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 ZBTB2Q8N680 514 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 GPATCH11Q8N954 259 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SIDT2Q8NBJ9 832 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 DEFB124Q8NES8 71 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SPDYE1Q8NFV5 336 aaPredicted RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 OR6C4Q8NGE1 309 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 UHMK1Q8TAS1 419 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 MAPK15Q8TD08 544 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 CD200R1Q8TD46 325 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SLC37A2Q8TED4 501 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SLC44A1Q8WWI5 657 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 INPP5DQ92835 1189 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 ATXN7L3BQ96GX2 97 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 GPR21Q99679 349 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 GPR22Q99680 433 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 OLFM1Q99784 485 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SLC32A1Q9H598 525 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 SARS2Q9NP81 518 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 TAS2R13Q9NYV9 303 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 TXNDC16Q9P2K2 825 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 MTO1Q9Y2Z2 717 aaKnown RBP12.56□□□□□ -0.4
TCOF1-210ENST00000506767 DMXL1Q9Y485 3027 aa12.56□□□□□ -0.4
TCOF1-210ENST00000506767 HMX2A2RU54 273 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 OR52A4PA6NMU1 304 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 PPM1DO15297 605 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 NUDT21O43809 227 aaKnown RBP12.55□□□□□ -0.4
TCOF1-210ENST00000506767 SLC35G4P0C7Q5 338 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 CEACAM1P13688 526 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 PNLIPP16233 465 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 GLB1P16278 677 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 GCAP28676 217 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 ATP5DP30049 168 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 HSD17B3P37058 310 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 DUSP3P51452 185 aaPredicted RBP12.55□□□□□ -0.4
TCOF1-210ENST00000506767 POU4F1Q01851 419 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 DNAJC3Q13217 504 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 NR1D2Q14995 579 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 TMED2Q15363 201 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 TRIP6Q15654 476 aaKnown RBP12.55□□□□□ -0.4
TCOF1-210ENST00000506767 ACSBG2Q5FVE4 666 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 ZNF438Q7Z4V0 828 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 SPNS2Q8IVW8 549 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 MREGQ8N565 214 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 AVL9Q8NBF6 648 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 FAM136AQ96C01 138 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 ELMO2Q96JJ3 720 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 DHRS4Q9BTZ2 278 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 SLC40A1Q9NP59 571 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 POT1Q9NUX5 634 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 TOR4AQ9NXH8 423 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 CPNE7Q9UBL6 633 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 FETUBQ9UGM5 382 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 RNF215Q9Y6U7 377 aa12.55□□□□□ -0.4
TCOF1-210ENST00000506767 DCDC2BA2VCK2 349 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 EIF3FO00303 357 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 IFRD1O00458 451 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 DKK1O94907 266 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 WISP3O95389 354 aaPredicted RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 GP1BAP07359 652 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 ITGA2BP08514 1039 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 CBSLP0DN79 551 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 MTHFD1P11586 935 aaKnown RBP12.54□□□□□ -0.4
TCOF1-210ENST00000506767 CBSP35520 551 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 ACADVLP49748 655 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 CSRP3P50461 194 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 PGGT1BP53609 377 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 TAS2R39P59534 338 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 DAB2P98082 770 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 HHEXQ03014 270 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 PERM1Q5SV97 790 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 GUSBP11Q6P575 273 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 PAQR3Q6TCH7 311 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 CYHR1Q6ZMK1 362 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 NEK10Q6ZWH5 1172 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 PIM3Q86V86 326 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 CEP97Q8IW35 865 aa12.54□□□□□ -0.4
TCOF1-210ENST00000506767 RBM12BQ8IXT5 1001 aaKnown RBP12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms