RNA–Protein interactions for RNA: ENST00000506419.5

CDC42SE2-209, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-209ENST00000506419 PRICKLE2Q7Z3G6 844 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 PTRH1Q86Y79 214 aaKnown RBP14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 RNF10Q8N5U6 811 aaKnown RBP14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 HM13Q8TCT9 377 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 STYXQ8WUJ0 223 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 HEXDCQ8WVB3 486 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 FERD3LQ96RJ6 166 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 RUFY1Q96T51 708 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 CCM2Q9BSQ5 444 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 ADNPQ9H2P0 1102 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 COG4Q9H9E3 785 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 ETNK1Q9HBU6 452 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 LNPEPQ9UIQ6 1025 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 PADI1Q9ULC6 663 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 COLEC10Q9Y6Z7 277 aa14.02□□□□□ -0.17
CDC42SE2-209ENST00000506419 UBA6A0AVT1 1052 aaPredicted RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 CCDC78A2IDD5 438 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR51F1A6NGY5 319 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 BTN3A3O00478 584 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 PSMD3O43242 534 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 KATNA1O75449 491 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF189O75820 626 aaPredicted RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 PTMAP06454 111 aaKnown RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 SLC35G4P0C7Q5 338 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 ETS1P14921 441 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 GRIA1P42261 906 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 HSD11B2P80365 405 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 TUBB3Q13509 450 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 OASLQ15646 514 aaKnown RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 CCDC38Q502W7 563 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 CRTC2Q53ET0 693 aaPredicted RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 FAM199XQ6PEV8 388 aaPredicted RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 TMEM135Q86UB9 458 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR52K1Q8NGK4 314 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 C1orf54Q8WWF1 131 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 CD180Q99467 661 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 TRIM4Q9C037 500 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 PDE7BQ9NP56 450 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 LHX9Q9NQ69 397 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 FGF21Q9NSA1 209 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 RARRES3Q9UL19 164 aa14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 HEMK1Q9Y5R4 338 aaPredicted RBP14.01□□□□□ -0.17
CDC42SE2-209ENST00000506419 CCDC162PA2VCL2 907 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 TLCD2A6NGC4 264 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 SLC9B1P1A6NJY1 282 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 CFAP99D6REC4 459 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 LIASO43766 372 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 WISP1O95388 367 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 CCNYL3P0C7X3 344 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 STIP1P31948 543 aaKnown RBP14□□□□□ -0.17
CDC42SE2-209ENST00000506419 PREPP48147 710 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 MC1RQ01726 317 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 ACY1Q03154 408 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 CACNG1Q06432 222 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 SEPT6Q14141 434 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 ERV3-1Q14264 604 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 KRT33BQ14525 404 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 GPR19Q15760 415 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 PRAMEF17Q5VTA0 474 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 OOSP2Q86WS3 158 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 KMT5CQ86Y97 462 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 SLC13A5Q86YT5 568 aaPredicted RBP14□□□□□ -0.17
CDC42SE2-209ENST00000506419 GLIS1Q8NBF1 620 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 SLC38A9Q8NBW4 561 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 ACVR1CQ8NER5 493 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 CT55Q8WUE5 264 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF501Q96CX3 271 aaPredicted RBP14□□□□□ -0.17
CDC42SE2-209ENST00000506419 STAMBPL1Q96FJ0 436 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 ABHD17AQ96GS6 310 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 FCRL4Q96PJ5 515 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF71Q9NQZ8 489 aaPredicted RBP14□□□□□ -0.17
CDC42SE2-209ENST00000506419 SMARCAL1Q9NZC9 954 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 SLC2A6Q9UGQ3 507 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 PCDHGA6Q9Y5G7 932 aa14□□□□□ -0.17
CDC42SE2-209ENST00000506419 K7EM74 188 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 SUN1O94901 812 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZBTB11O95625 1053 aaPredicted RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 TPBGLP0DKB5 382 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 NDUFS1P28331 727 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 PRDX3P30048 256 aaKnown RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 FOXN2P32314 431 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 CD151P48509 253 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 ARL4DP49703 201 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 KCNC4Q03721 635 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 PRKG2Q13237 762 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 DNASE1L3Q13609 305 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 P3H1Q32P28 736 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 LCN10Q6JVE6 187 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 NAPRTQ6XQN6 538 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 ATG14Q6ZNE5 492 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 BPHLQ86WA6 291 aaPredicted RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 OR13J1Q8NGT2 312 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 APOBEC4Q8WW27 367 aaKnown RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 LCN9Q8WX39 176 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 TFGQ92734 400 aaPredicted RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 LRRC45Q96CN5 670 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 ZNF778Q96MU6 729 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 TFB2MQ9H5Q4 396 aaKnown RBP13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 XKR8Q9H6D3 395 aa13.99□□□□□ -0.17
CDC42SE2-209ENST00000506419 KCND1Q9NSA2 647 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms