RNA–Protein interactions for RNA: ENST00000506161.5

PDLIM7-215, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-215ENST00000506161 TPBGLP0DKB5 382 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 MSNP26038 577 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 OAS2P29728 719 aaKnown RBP16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 KCNJ1P48048 391 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 GSDMDP57764 484 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 PDE1BQ01064 536 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 SEMA5AQ13591 1074 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 PLCL1Q15111 1095 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 RPS6KA1Q15418 735 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 TXLNBQ8N3L3 684 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 GALNT6Q8NCL4 622 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 LKAAEAR1Q8TD35 194 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 DCUN1D1Q96GG9 259 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 PPP1R2P1Q96PQ5 205 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 KIR3DX1Q9H7L2 352 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 CASS4Q9NQ75 786 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 RAB6BQ9NRW1 208 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 ACSL5Q9ULC5 683 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 ZNF148Q9UQR1 794 aa16.3■□□□□ 0.2
PDLIM7-215ENST00000506161 BTN3A3O00478 584 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 TOX3O15405 576 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 KIAA0754O94854 1291 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 GOT2P00505 430 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 FGF5P12034 268 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 POLR2CP19387 275 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 CXCR5P32302 372 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 STAT5AP42229 794 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 CRADDP78560 199 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 CACNG1Q06432 222 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 BRD3Q15059 726 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 GPR33Q49SQ1 333 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 TSTD2Q5T7W7 516 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 PRAMEF17Q5VTA0 474 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 ZNF662Q6ZS27 426 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 LDB1Q86U70 411 aaPredicted RBP16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 SPNS2Q8IVW8 549 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 HDAC10Q969S8 669 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 XKR8Q9H6D3 395 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 HRASLS2Q9NWW9 162 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 SMARCAL1Q9NZC9 954 aa16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 TNRC6AQ8NDV7 1962 aaKnown RBP16.29■□□□□ 0.2
PDLIM7-215ENST00000506161 TCRBV7S3A2A0A539 114 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 PSMD3O43242 534 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 SPAG6O75602 509 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 FURINP09958 794 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 SLC35G4P0C7Q5 338 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 PRKAR1AP10644 381 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 STIP1P31948 543 aaKnown RBP16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 FDFT1P37268 417 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 ACVR1Q04771 509 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 CDH17Q12864 832 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 GPR19Q15760 415 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 PWWP2BQ6NUJ5 590 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 LMNTD1Q8N9Z9 388 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 OR4E2Q8NGC2 313 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 ZDHHC12Q96GR4 267 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 SLC45A3Q96JT2 553 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 CCM2Q9BSQ5 444 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 ULBP3Q9BZM4 244 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 MARCH4Q9P2E8 410 aaPredicted RBP16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 RPS6KL1Q9Y6S9 549 aa16.28■□□□□ 0.2
PDLIM7-215ENST00000506161 C17orf113A0A1B0GUU1 675 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 GOLGA6L3A6NEY3 463 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 BHMG1C9JSJ3 638 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 BTN3A1O00481 513 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 FGGP02679 453 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 CCDC175P0C221 793 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 RALBP11234 206 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 PVRP15151 417 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 MAP4P27816 1152 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 ABHD18Q0P651 414 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 GSE1Q14687 1217 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 DNTTIP2Q5QJE6 756 aaKnown RBP16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 TMEM135Q86UB9 458 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 RASGRP3Q8IV61 690 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 DNAAF3Q8N9W5 541 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 OR52E1Q8NGJ3 308 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 FERD3LQ96RJ6 166 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 RANBP9Q96S59 729 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 ZPBPQ9BS86 351 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 HGH1Q9BTY7 390 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 GPN2Q9H9Y4 310 aaPredicted RBP16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 TCAF1Q9Y4C2 921 aa16.27■□□□□ 0.2
PDLIM7-215ENST00000506161 MED13Q9UHV7 2174 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 SLC5A10A0PJK1 596 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 TLCD2A6NGC4 264 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 IQCF5A8MTL0 148 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 CFAP99D6REC4 459 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 HCRTR1O43613 425 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 ZNF189O75820 626 aaPredicted RBP16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 ITGB2P05107 769 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 APRTP07741 180 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 ACADLP28330 430 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 TERF1P54274 439 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 CDC20Q12834 499 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 PRKG2Q13237 762 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 TUBB3Q13509 450 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 BOP1Q14137 746 aaKnown RBP16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 CCNG2Q16589 344 aa16.26■□□□□ 0.19
PDLIM7-215ENST00000506161 LCN10Q6JVE6 187 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms