RNA–Protein interactions for RNA: ENST00000505583.5

GYPB-205, Transcript of glycophorin B (MNS blood group), human

TSL 1 (best)

Gene GYPB, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
GYPB-205	ENST00000505583	TLR10	Q9BXR5	811 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	GPR87	Q9BY21	358 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	RAD18	Q9NS91	495 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	SPTLC3	Q9NUV7	552 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	SLC24A2	Q9UI40	661 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	VPS4A	Q9UN37	437 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	FARSA	Q9Y285	508 aa	Known RBP	5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	PIKFYVE	Q9Y2I7	2098 aa		5.7	□□□□□ -1.5
GYPB-205	ENST00000505583	SPTAN1	Q13813	2472 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	NUP210L	Q5VU65	1888 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	GOLGA6L22	H0YM25	854 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	MEN1	O00255	615 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	BTN3A3	O00478	584 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CCL22	O00626	93 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	PPP1R12A	O14974	1030 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ZNF185	O15231	689 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CST8	O60676	142 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	KCNJ13	O60928	360 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CPNE3	O75131	537 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	TMEM63A	O94886	807 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	PRAMEF1	O95521	474 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ZBTB11	O95625	1053 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CLDN1	O95832	211 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	AGT	P01019	485 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CTSB	P07858	339 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	PVR	P15151	417 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ST6GAL1	P15907	406 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	VCL	P18206	1134 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	POLR2C	P19387	275 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	COMT	P21964	271 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	LPO	P22079	712 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	MARCKSL1	P49006	195 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ARL4D	P49703	201 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	RPS15	P62841	145 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	MSLN	Q13421	630 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	INPP5J	Q15735	1006 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	SLC1A5	Q15758	541 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	PPP2R5E	Q16537	467 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	PTCHD3	Q3KNS1	767 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	LINC01559	Q495D7	138 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	LDLRAP1	Q5SW96	308 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	SLC6A19	Q695T7	634 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ZNF787	Q6DD87	383 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CCDC70	Q6NSX1	233 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	FAM198B	Q6UWH4	519 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	GLT6D1	Q7Z4J2	308 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ZC3H18	Q86VM9	953 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	BPHL	Q86WA6	291 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	VSIG1	Q86XK7	387 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	KMT5C	Q86Y97	462 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	DSEL	Q8IZU8	1212 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ZBTB2	Q8N680	514 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	OR4E2	Q8NGC2	313 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ZNF398	Q8TD17	642 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	DTX3L	Q8TDB6	740 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	SSC4D	Q8WTU2	575 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	TFB1M	Q8WVM0	346 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	HAUS1	Q96CS2	278 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	C12orf66	Q96MD2	445 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	TTC25	Q96NG3	672 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	FCRL5	Q96RD9	977 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CD180	Q99467	661 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	APOL2	Q9BQE5	337 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	MAK16	Q9BXY0	300 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	XPO4	Q9C0E2	1151 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	KLHL25	Q9H0H3	589 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	TRABD	Q9H4I3	376 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	FAM96A	Q9H5X1	160 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	KIR3DX1	Q9H7L2	352 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CASS4	Q9NQ75	786 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ACSS2	Q9NR19	701 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	KCND1	Q9NSA2	647 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	PCMTD2	Q9NV79	361 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	FAM153A	Q9UHL3	310 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ERRFI1	Q9UJM3	462 aa	Predicted RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	TCFL5	Q9UL49	500 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	TFR2	Q9UP52	801 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	BTRC	Q9Y297	605 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ARL5A	Q9Y689	179 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	SNRNP200	O75643	2136 aa	Known RBP	5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	ESPL1	Q14674	2120 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CROCC	Q5TZA2	2017 aa		5.69	□□□□□ -1.5
GYPB-205	ENST00000505583	CACNA1D	Q01668	2161 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	MGAT4D	A6NG13	374 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	AGAP14	A8MT82	685 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	TMEM150C	B9EJG8	249 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	BTN3A1	O00481	513 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	AKR1B10	O60218	316 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	CNOT3	O75175	753 aa	Known RBP	5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	KLF7	O75840	302 aa	Predicted RBP	5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	SRP72	O76094	671 aa	Known RBP	5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	EPO	P01588	193 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	PRSS56	P0CW18	603 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	HLA-DPA1	P20036	260 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	MSH3	P20585	1137 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	PDHA2	P29803	388 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	PRDX3	P30048	256 aa	Known RBP	5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	AKT1	P31749	480 aa		5.68	□□□□□ -1.5
GYPB-205	ENST00000505583	ANP32A	P39687	249 aa	Known RBP	5.68	□□□□□ -1.5

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