RNA–Protein interactions for RNA: ENST00000504889.5

SPOP-208, Transcript of speckle type BTB/POZ protein, humanhuman

TSL 2

Gene SPOP, Length 400 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPOP-208ENST00000504889 ACTRT1Q8TDG2 376 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 TFGQ92734 400 aaPredicted RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 KIAA1143Q96AT1 154 aaPredicted RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 ZNF669Q96BR6 464 aaPredicted RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 RNF31Q96EP0 1072 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 CRELD1Q96HD1 420 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 LINC00615Q96LM1 132 aaPredicted RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 C9orf72Q96LT7 481 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 ZNF778Q96MU6 729 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 TEFMQ96QE5 360 aaKnown RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 PANX3Q96QZ0 392 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 OR6C1Q96RD1 312 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 CCNL2Q96S94 520 aaPredicted RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 C19orf43Q9BQ61 176 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 ARHGAP9Q9BRR9 750 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 ULBP3Q9BZM4 244 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 DDX47Q9H0S4 455 aaKnown RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 CCDC68Q9H2F9 335 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 TRIT1Q9H3H1 467 aaKnown RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 SRMSQ9H3Y6 488 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 UCK1Q9HA47 277 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 FANCEQ9HB96 536 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 PPANQ9NQ55 473 aaKnown RBP5.8□□□□□ -1.48
SPOP-208ENST00000504889 OCIAD1Q9NX40 245 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 FOXJ2Q9P0K8 574 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 GNPTGQ9UJJ9 305 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 PYCARDQ9ULZ3 195 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 PCDHGA7Q9Y5G6 932 aa5.8□□□□□ -1.48
SPOP-208ENST00000504889 MN1Q10571 1320 aaPredicted RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 IGLV3-16A0A075B6K0 115 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 TRBV5-4A0A0C4DH59 114 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 TCRBV7S3A2A0A539 114 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PABPN1LA6NDY0 278 aaKnown RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 OR5K3A6NET4 321 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 SDR42E2A6NKP2 422 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 AGAP14A8MT82 685 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 C9orf172C9J069 976 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CES2O00748 559 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 NVLO15381 856 aaKnown RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 KIF1CO43896 1103 aaKnown RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 CAPNS1P04632 268 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 RPN2P04844 631 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CHRM3P20309 590 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CD82P27701 267 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PDHA2P29803 388 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 DR1Q01658 176 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PLOD1Q02809 727 aaPredicted RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 CFHR1Q03591 330 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 VAC14Q08AM6 782 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 ABRQ12979 859 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 RPA4Q13156 261 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CLN3Q13286 438 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 MSLNQ13421 630 aaPredicted RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 SQSTM1Q13501 440 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 TUBB3Q13509 450 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 KCNJ11Q14654 390 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 TGIF1Q15583 401 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 RNF187Q5TA31 235 aaPredicted RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 ANKRD22Q5VYY1 191 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 IZUMO3Q5VZ72 239 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PACS1Q6VY07 963 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 OTOAQ7RTW8 1153 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PCGF5Q86SE9 256 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CLEC14AQ86T13 490 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 VASH2Q86V25 355 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 AMIGO1Q86WK6 493 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PPP1R3BQ86XI6 285 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CACNA2D3Q8IZS8 1091 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 KRT222Q8N1A0 295 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 ACVR1CQ8NER5 493 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 OR52E1Q8NGJ3 308 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 ASZ1Q8WWH4 475 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 UBXN4Q92575 508 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PEX13Q92968 403 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 FAM136AQ96C01 138 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 MFSD3Q96ES6 412 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 STAMBPL1Q96FJ0 436 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 RMDN2Q96LZ7 410 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 FOPNLQ96NB1 174 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 RUNDC3BQ96NL0 473 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 ZPBPQ9BS86 351 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 DDA1Q9BW61 102 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 TRIM31Q9BZY9 425 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 KIR3DX1Q9H7L2 352 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 XAB2Q9HCS7 855 aaKnown RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 PDE7BQ9NP56 450 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 C20orf96Q9NUD7 363 aaPredicted RBP5.79□□□□□ -1.48
SPOP-208ENST00000504889 SLC24A2Q9UI40 661 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 LNPEPQ9UIQ6 1025 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 SLC39A10Q9ULF5 831 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 RIMKLBQ9ULI2 386 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 SOX13Q9UN79 622 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 VPS9D1Q9Y2B5 631 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CRYL1Q9Y2S2 319 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 B3GALT1Q9Y5Z6 326 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 PRSS21Q9Y6M0 314 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP5.79□□□□□ -1.48
SPOP-208ENST00000504889 RPS6KL1Q9Y6S9 549 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 LAMA5O15230 3695 aa5.79□□□□□ -1.48
SPOP-208ENST00000504889 CABIN1Q9Y6J0 2220 aa5.78□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms