RNA–Protein interactions for RNA: ENST00000504387.5

NEDD9-208, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NEDD9, Length 3,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-208ENST00000504387 RHOXF1Q8NHV9 184 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 METTL6Q8TCB7 284 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 HDAC2Q92769 488 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 CEP19Q96LK0 163 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF560Q96MR9 790 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 FYTTD1Q96QD9 318 aaKnown RBP7.51□□□□□ -1.21
NEDD9-208ENST00000504387 MCMBPQ9BTE3 642 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 OR51E2Q9H255 320 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 NSMCE4AQ9NXX6 385 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 VNN3Q9NY84 501 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 EHD3Q9NZN3 535 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 RNF181Q9P0P0 153 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 PRELID1Q9Y255 219 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 GPR45Q9Y5Y3 372 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 NRXN2Q9P2S2 1712 aa7.51□□□□□ -1.21
NEDD9-208ENST00000504387 SCAMP3O14828 347 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 DYRK3O43781 588 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 UPK1BO75841 260 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 POU2F1P14859 743 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 IGFBP5P24593 272 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 S100A5P33763 92 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PPP5CP53041 499 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 RPL38P63173 70 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 MXD1Q05195 221 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SLC10A7Q0GE19 358 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SEMA3AQ14563 771 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 FAM174BQ3ZCQ3 159 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CYP27C1Q4G0S4 372 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 BCL7AQ4VC05 210 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 RFTN2Q52LD8 501 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 RBM48Q5RL73 367 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TPRG1LQ5T0D9 272 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ATAD3CQ5T2N8 411 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SDE2Q6IQ49 451 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PRMT9Q6P2P2 845 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF549Q6P9A3 640 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TAC4Q86UU9 113 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 LSRQ86X29 649 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 GALNT13Q8IUC8 556 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 LRRC49Q8IUZ0 686 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SLC38A6Q8IZM9 456 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ELMOD1Q8N336 334 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 OR52J3Q8NH60 311 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SUN5Q8TC36 379 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PROKR1Q8TCW9 393 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CCDC126Q96EE4 140 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 DUS3LQ96G46 650 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ZNF641Q96N77 438 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 VAT1Q99536 393 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 KATNAL1Q9BW62 490 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 LRRC3Q9BY71 257 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 NUAK2Q9H093 628 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 KIF17Q9P2E2 1029 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TRHDEQ9UKU6 1024 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ADAMTS5Q9UNA0 930 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TRIM64A6NGJ6 449 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CENPXA8MT69 81 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 BBIP1A8MTZ0 92 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 H0YAE9 185 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PCMT1P22061 227 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 RAB25P57735 213 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PRKG2Q13237 762 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TUBA3CQ13748 450 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CRY1Q16526 586 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ZMAT1Q5H9K5 638 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CES5AQ6NT32 575 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CEP68Q76N32 757 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 NRARPQ7Z6K4 114 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ZDHHC17Q8IUH5 632 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CILP2Q8IUL8 1156 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 EID3Q8N140 333 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TTC30BQ8N4P2 665 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TMEM199Q8N511 208 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PARP16Q8N5Y8 322 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 DYNC2LI1Q8TCX1 351 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TPD52L3Q96J77 140 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CGREF1Q99674 301 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TRIM54Q9BYV2 358 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SLIRPQ9GZT3 109 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 TIGARQ9NQ88 270 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 FARSBQ9NSD9 589 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SCN3BQ9NY72 215 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 UXTQ9UBK9 157 aaPredicted RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 FBXW11Q9UKB1 542 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 UBQLN1Q9UMX0 589 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 WDR81Q562E7 1941 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 FAM92AA1XBS5 289 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SMLR1H3BR10 107 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ANXA9O76027 345 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 B3GAT3O94766 335 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CAPN1P07384 714 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 MTHFD2P13995 350 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CD1DP15813 335 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 PRKCAP17252 672 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 SDHBP21912 280 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 CD6P30203 668 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 DCTP40126 519 aa7.5□□□□□ -1.21
NEDD9-208ENST00000504387 EIF2DP41214 584 aaKnown RBP7.5□□□□□ -1.21
NEDD9-208ENST00000504387 ARHGAP1Q07960 439 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms