RNA–Protein interactions for RNA: ENST00000503468.5

NEDD4-204, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 6,339 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-204ENST00000503468 ANKRD26P1Q6NSI1 321 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 LETMD1Q6P1Q0 360 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RAPH1Q70E73 1250 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CDKL3Q8IVW4 592 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TMEM199Q8N511 208 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 DCLK2Q8N568 766 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 FNDC5Q8NAU1 212 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 Q8NFD4 153 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 OR6Q1Q8NGQ2 317 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TBCKQ8TEA7 893 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 IPCEF1Q8WWN9 437 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZHX1-C8orf76Q96EF9 292 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 VPS39Q96JC1 886 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 MSLNLQ96KJ4 702 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 KLHL32Q96NJ5 620 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 CSRNP1Q96S65 589 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 REEP2Q9BRK0 252 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GTPBP2Q9BX10 602 aaKnown RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GLIS2Q9BZE0 524 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 P2RY12Q9H244 342 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 COPS7BQ9H9Q2 264 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 RDH14Q9HBH5 336 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 TOPORSQ9NS56 1045 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 SLC9A2Q9UBY0 812 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ADAMTS6Q9UKP5 1117 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ERVW-1Q9UQF0 538 aa2.75□□□□□ -1.97
NEDD4-204ENST00000503468 ZFP37Q9Y6Q3 630 aaPredicted RBP2.75□□□□□ -1.97
NEDD4-204ENST00000503468 GIMAP1-GIMAP5A0A087WTJ2 511 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TCRBV3S1A0A5B6 114 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 DENND3A2RUS2 1198 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CCRL2O00421 344 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 NPC1O15118 1278 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CD3EAPO15446 510 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 DCXO43602 365 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 UGT2B17O75795 530 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GDF11O95390 407 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TBX6O95947 436 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PDGFAP04085 211 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ACADMP11310 421 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SFTPCP11686 197 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 EIF2AK2P19525 551 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MATN1P21941 496 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CES1P23141 567 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PIK3R1P27986 724 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 HNF4AP41235 474 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 UGT2B15P54855 530 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJB13P59910 316 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PRKCDQ05655 676 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TRAF3Q13114 568 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TAF5Q15542 800 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FASTKD1Q53R41 847 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 KCNT1Q5JUK3 1230 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 BRMS1LQ5PSV4 323 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 IKBIPQ70UQ0 350 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ADAT2Q7Z6V5 191 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SNX32Q86XE0 403 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RHPN2Q8IUC4 686 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SLC7A5P1Q8MH63 180 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LGI2Q8N0V4 545 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CDYL2Q8N8U2 506 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CAMKVQ8NCB2 501 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 OR10Z1Q8NGY1 313 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ACTL9Q8TC94 416 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 DNAJA4Q8WW22 397 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 OTULINQ96BN8 352 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GIMAP5Q96F15 307 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 AURKBQ96GD4 344 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LRIG1Q96JA1 1093 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LCORQ96JN0 433 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FAM118BQ9BPY3 351 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 HTATIP2Q9BUP3 242 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RACGAP1Q9H0H5 632 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SDCBP2Q9H190 292 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 GAREM1Q9H706 876 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MAN1C1Q9NR34 630 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MARCH5Q9NX47 278 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FZD1Q9UP38 647 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 WDR87Q6ZQQ6 2873 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 MUC6Q6W4X9 2439 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LOC100653049A0A140TA62 436 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 FAM237BA0A1B0GVD1 139 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 OR5K3A6NET4 321 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CLDN24A6NM45 220 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 H0Y858 1186 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 H0YIN7 160 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 UBXN8O00124 270 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PSMD11O00231 422 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 LIASO43766 372 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 KRT34O76011 436 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SRP72O76094 671 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 RECQL5O94762 991 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 SOX30O94993 753 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 TDP2O95551 362 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 HLA-DRAP01903 254 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ENO3P13929 434 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 NCF1P14598 390 aaPredicted RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 PDGFRAP16234 1089 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 CD86P42081 329 aa2.74□□□□□ -1.97
NEDD4-204ENST00000503468 EIF3EP60228 445 aaKnown RBP2.74□□□□□ -1.97
NEDD4-204ENST00000503468 ISL1P61371 349 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms