RNA–Protein interactions for RNA: ENST00000496959.5

MDM2-220, Transcript of MDM2 proto-oncogene, humanhuman

TSL 1 (best)

Gene MDM2, Length 897 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-220ENST00000496959 ATP1A3P13637 1013 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 HOXC8P31273 242 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 GNB1P62873 340 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 DUOXA1Q1HG43 343 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 LRIF1Q5T3J3 769 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 INTS11Q5TA45 600 aaKnown RBP4.93□□□□□ -1.62
MDM2-220ENST00000496959 ANO5Q75V66 913 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 ARHGAP12Q8IWW6 846 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 ARHGEF28Q8N1W1 1705 aaKnown RBP4.93□□□□□ -1.62
MDM2-220ENST00000496959 RASGEF1CQ8N431 466 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 C1orf52Q8N6N3 182 aaKnown RBP4.93□□□□□ -1.62
MDM2-220ENST00000496959 HCAR2Q8TDS4 363 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 TMEM190Q8WZ59 177 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 RFFLQ8WZ73 363 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 SLC38A7Q9NVC3 462 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 MTMR10Q9NXD2 777 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 EHD2Q9NZN4 543 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 STK26Q9P289 416 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 ACAD8Q9UKU7 415 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 TMEM184BQ9Y519 407 aaPredicted RBP4.93□□□□□ -1.62
MDM2-220ENST00000496959 YIPF1Q9Y548 306 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 SBF2Q86WG5 1849 aa4.93□□□□□ -1.62
MDM2-220ENST00000496959 TOPAZ1Q8N9V7 1692 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 BRD4O60885 1362 aaPredicted RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 PLEKHH1Q9ULM0 1364 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 NRKQ7Z2Y5 1582 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 H3BQ06 376 aaPredicted RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 RTN3O95197 1032 aaPredicted RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 BMP10O95393 424 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 HIST1H2ABP04908 130 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 GNAZP19086 355 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 MSH3P20585 1137 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 HIST1H2ADP20671 130 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 RGS2P41220 211 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 TBCEQ15813 527 aaPredicted RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 HIST3H2AQ7L7L0 130 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 CPLX4Q7Z7G2 160 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 IL17REQ8NFR9 667 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 KCNG4Q8TDN1 519 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 ZNF473Q8WTR7 871 aaKnown RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 PERPQ96FX8 193 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 PRMT6Q96LA8 375 aaPredicted RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 WDFY2Q96P53 400 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 ASCL2Q99929 193 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 APOBEC3GQ9HC16 384 aaKnown RBP4.92□□□□□ -1.62
MDM2-220ENST00000496959 OGFRQ9NZT2 677 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 KIAA1210Q9ULL0 1709 aa4.92□□□□□ -1.62
MDM2-220ENST00000496959 CASZ1Q86V15 1759 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 OVOS2A0A0G2JMS6 1433 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 OVOS2A0A0J9YW53 1432 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 OVOS2Q6IE36 1432 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 SSH2Q76I76 1423 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 A0A1B0GU03 582 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 DUXAA6NLW8 204 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 PSMD14O00487 310 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 IGLV1-44P01699 117 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 EIF2S1P05198 315 aaKnown RBP4.91□□□□□ -1.62
MDM2-220ENST00000496959 CLEC3BP05452 202 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 LIPFP07098 398 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 TAF6P49848 677 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 RPS3AP61247 264 aaKnown RBP4.91□□□□□ -1.62
MDM2-220ENST00000496959 RAB6CQ53S08 254 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 NDUFAF5Q5TEU4 345 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 ZC2HC1BQ5TFG8 222 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 GLDNQ6ZMI3 551 aaPredicted RBP4.91□□□□□ -1.62
MDM2-220ENST00000496959 WDR20Q8TBZ3 569 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 TAF15Q92804 592 aaKnown RBP eCLIP4.91□□□□□ -1.62
MDM2-220ENST00000496959 ARHGEF2Q92974 986 aaKnown RBP4.91□□□□□ -1.62
MDM2-220ENST00000496959 RAB6CQ9H0N0 254 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 RAD21L1Q9H4I0 556 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 SMC4Q9NTJ3 1288 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 DBNLQ9UJU6 430 aaKnown RBP4.91□□□□□ -1.62
MDM2-220ENST00000496959 LMO7Q8WWI1 1683 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 ADGRB1O14514 1584 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 CPDO75976 1380 aa4.91□□□□□ -1.62
MDM2-220ENST00000496959 QRICH2Q9H0J4 1663 aa4.9□□□□□ -1.62
MDM2-220ENST00000496959 ZBTB43O43298 467 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 GPC4O75487 556 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 WISP2O76076 250 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 TBX6O95947 436 aaPredicted RBP4.9□□□□□ -1.63
MDM2-220ENST00000496959 TSHBP01222 138 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 GNB3P16520 340 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 HRH2P25021 359 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 PSMA4P25789 261 aaKnown RBP4.9□□□□□ -1.63
MDM2-220ENST00000496959 HOXA13P31271 388 aaPredicted RBP4.9□□□□□ -1.63
MDM2-220ENST00000496959 KRT9P35527 623 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 GALCP54803 685 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 CD81P60033 236 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 FAM53AQ6NSI3 398 aaPredicted RBP4.9□□□□□ -1.63
MDM2-220ENST00000496959 TSPAN33Q86UF1 283 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 KRTAP7-1Q8IUC3 87 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 PCYOX1LQ8NBM8 494 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 NAXEQ8NCW5 288 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 GSDMBQ8TAX9 411 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 ZKSCAN4Q969J2 545 aaPredicted RBP4.9□□□□□ -1.63
MDM2-220ENST00000496959 PRAM1Q96QH2 718 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 NUDCD1Q96RS6 583 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 NCAPGQ9BPX3 1015 aa4.9□□□□□ -1.63
MDM2-220ENST00000496959 SLX1AQ9BQ83 275 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms