RNA–Protein interactions for RNA: ENST00000496445.5

VTI1A-209, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 853 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-209ENST00000496445 CDKN2AIPNLQ96HQ2 116 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 CATSPER2Q96P56 530 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 CD180Q99467 661 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 NRTNQ99748 197 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 ADNPQ9H2P0 1102 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 HRASLS2Q9NWW9 162 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 LNPEPQ9UIQ6 1025 aa13.91□□□□□ -0.18
VTI1A-209ENST00000496445 C17orf113A0A1B0GUU1 675 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 OR6C74A6NCV1 312 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 MROH6A6NGR9 719 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 OR51F1A6NGY5 319 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 LIASO43766 372 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 PDHA2P29803 388 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 CACNG1Q06432 222 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 KCNAB2Q13303 367 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 CCDC38Q502W7 563 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 PWWP2BQ6NUJ5 590 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 FBXO38Q6PIJ6 1188 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 KMT5CQ86Y97 462 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 D2HGDHQ8N465 521 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 CLDN19Q8N6F1 224 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 OR52K1Q8NGK4 314 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 STYXQ8WUJ0 223 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 CCM2Q9BSQ5 444 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 FAM117AQ9C073 453 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 SLC25A18Q9H1K4 315 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 PDE7BQ9NP56 450 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 RARRES3Q9UL19 164 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 PRSS21Q9Y6M0 314 aa13.9□□□□□ -0.18
VTI1A-209ENST00000496445 NBPF19A0A087WUL8 3843 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 UBA6A0AVT1 1052 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 SNRNP200O75643 2136 aaKnown RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 SFTPCP11686 197 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 POLR2CP19387 275 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 MSNP26038 577 aaKnown RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 NDUFS1P28331 727 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 FOXN2P32314 431 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 CCR10P46092 362 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 PREPP48147 710 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 ACY1Q03154 408 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 GSE1Q14687 1217 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 DEFB109BQ30KR1 87 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 CRTC2Q53ET0 693 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 SEL1L2Q5TEA6 688 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 C16orf46Q6P387 395 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 CYB5D1Q6P9G0 228 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 TAS2R42Q7RTR8 314 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 PRUNE1Q86TP1 453 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 SLC13A5Q86YT5 568 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 GLIS1Q8NBF1 620 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 ACVR1CQ8NER5 493 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 OR13J1Q8NGT2 312 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 CT55Q8WUE5 264 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 C1orf54Q8WWF1 131 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 RUFY1Q96T51 708 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 TRIM4Q9C037 500 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 AKIRIN1Q9H9L7 192 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 LHX9Q9NQ69 397 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 TUBD1Q9UJT1 453 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 POMT2Q9UKY4 750 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 GUCA1BQ9UMX6 200 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 BTRCQ9Y297 605 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 HEMK1Q9Y5R4 338 aaPredicted RBP13.89□□□□□ -0.19
VTI1A-209ENST00000496445 HEBP2Q9Y5Z4 205 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 COLEC10Q9Y6Z7 277 aa13.89□□□□□ -0.19
VTI1A-209ENST00000496445 SPTBP11277 2137 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 CCDC162PA2VCL2 907 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 BTN3A1O00481 513 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 PSMD3O43242 534 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 SUV39H1O43463 412 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 SUN1O94901 812 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 ZBTB11O95625 1053 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-209ENST00000496445 FURINP09958 794 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 ETS1P14921 441 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 TCN2P20062 427 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 GRIA1P42261 906 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 TUBB4BP68371 445 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 HSD11B2P80365 405 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 MC1RQ01726 317 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 CDH17Q12864 832 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 TUBB2AQ13885 445 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 SIX1Q15475 284 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-209ENST00000496445 GPR19Q15760 415 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 LINC00523Q86TU6 105 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 OR4E2Q8NGC2 313 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 OR52E1Q8NGJ3 308 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 ZNF501Q96CX3 271 aaPredicted RBP13.88□□□□□ -0.19
VTI1A-209ENST00000496445 TUBB2BQ9BVA1 445 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 TSGA10Q9BZW7 698 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 VPS37BQ9H9H4 285 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 ETNK1Q9HBU6 452 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 FGF21Q9NSA1 209 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 SLC2A6Q9UGQ3 507 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 PCDHGA6Q9Y5G7 932 aa13.88□□□□□ -0.19
VTI1A-209ENST00000496445 FER1L5A0AVI2 2057 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 COL12A1Q99715 3063 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 ERI2A8K979 691 aaKnown RBP13.87□□□□□ -0.19
VTI1A-209ENST00000496445 BTN3A3O00478 584 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 AP2A2O94973 939 aa13.87□□□□□ -0.19
VTI1A-209ENST00000496445 IFNB1P01574 187 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 236.9 ms