RNA–Protein interactions for RNA: ENST00000496375.1

CXCL12-208, Transcript of C-X-C motif chemokine ligand 12, humanhuman

TSL 5

Gene CXCL12, Length 803 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-208ENST00000496375 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP14.07□□□□□ -0.16
CXCL12-208ENST00000496375 EPHA6Q9UF33 1036 aa14.07□□□□□ -0.16
CXCL12-208ENST00000496375 PCYOX1Q9UHG3 505 aa14.07□□□□□ -0.16
CXCL12-208ENST00000496375 PSMD13Q9UNM6 376 aa14.07□□□□□ -0.16
CXCL12-208ENST00000496375 PKP3Q9Y446 797 aa14.07□□□□□ -0.16
CXCL12-208ENST00000496375 OR2AG2A6NM03 316 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 GAPDHSO14556 408 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-208ENST00000496375 SPAG6O75602 509 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 ZSCAN5DPP0CG00 497 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 NELFEP18615 380 aaKnown RBP14.06□□□□□ -0.16
CXCL12-208ENST00000496375 PBLDP30039 288 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-208ENST00000496375 PPP1CAP62136 330 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 CDK16Q00536 496 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 PDE1BQ01064 536 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 ITGA9Q13797 1035 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 NFE2L1Q14494 772 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 TAF1AQ15573 450 aaPredicted RBP14.06□□□□□ -0.16
CXCL12-208ENST00000496375 RPE65Q16518 533 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 PRUNE1Q86TP1 453 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 PPP1R3BQ86XI6 285 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 GRK7Q8WTQ7 553 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 ABHD17AQ96GS6 310 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 RAB33BQ9H082 229 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 LNPEPQ9UIQ6 1025 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 PCDHB3Q9Y5E6 796 aa14.06□□□□□ -0.16
CXCL12-208ENST00000496375 RELNP78509 3460 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 IGHV5-51A0A0C4DH38 117 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 CYSRT1A8MQ03 144 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 CCDC188H7C350 402 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 STX7O15400 261 aaKnown RBP14.05□□□□□ -0.16
CXCL12-208ENST00000496375 KATNA1O75449 491 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 TUBB4AP04350 444 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 TPSB2P20231 275 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 AKT1P31749 480 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 ZNF140P52738 457 aaPredicted RBP14.05□□□□□ -0.16
CXCL12-208ENST00000496375 CDH17Q12864 832 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 SEPT6Q14141 434 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 ERV3-1Q14264 604 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 SPARCL1Q14515 664 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 PTPRCAPQ14761 206 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 PLCL1Q15111 1095 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 TPSAB1Q15661 275 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 LARP7Q4G0J3 582 aaKnown RBP eCLIP14.05□□□□□ -0.16
CXCL12-208ENST00000496375 CYB5D1Q6P9G0 228 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 SYT10Q6XYQ8 523 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 GSTA5Q7RTV2 222 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 COL26A1Q96A83 441 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 SLC41A2Q96JW4 573 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 RUNDC3BQ96NL0 473 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 APOL2Q9BQE5 337 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 CASS4Q9NQ75 786 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 SEMA5BQ9P283 1151 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 ANAPC2Q9UJX6 822 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 KCTD3Q9Y597 815 aa14.05□□□□□ -0.16
CXCL12-208ENST00000496375 DNMT3AQ9Y6K1 912 aaPredicted RBP14.05□□□□□ -0.16
CXCL12-208ENST00000496375 C2orf81A6NN90 581 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 LDB2O43679 373 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 TIAF1O95411 115 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 PRAMEF1O95521 474 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 CRTAMO95727 393 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 GAS8O95995 478 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 KRT14P02533 472 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 FURINP09958 794 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 CCNYL3P0C7X3 344 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 FOLR1P15328 257 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 MSH3P20585 1137 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 LPOP22079 712 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 CASQ1P31415 396 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 CASRP41180 1078 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 TUBB3Q13509 450 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 KCNJ11Q14654 390 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 KCNAB1Q14722 419 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 LACTB2Q53H82 288 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 FNBP1LQ5T0N5 605 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 ARMC3Q5W041 872 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 KLHL35Q6PF15 583 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 DET1Q7L5Y6 550 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 ZNF572Q7Z3I7 529 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 BEND7Q8N7W2 519 aaPredicted RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 SIDT2Q8NBJ9 832 aaKnown RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 ZNF398Q8TD17 642 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 NAT14Q8WUY8 206 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 UBXN4Q92575 508 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 CAPZA3Q96KX2 299 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 RANBP9Q96S59 729 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 WWP1Q9H0M0 922 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 DDX47Q9H0S4 455 aaKnown RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 PDE7BQ9NP56 450 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 IMP3Q9NV31 184 aaKnown RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 SMOXQ9NWM0 555 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 KCND3Q9UK17 655 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 RARRES3Q9UL19 164 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 PADI1Q9ULC6 663 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 RIMKLBQ9ULI2 386 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 ARL5AQ9Y689 179 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 KCNMB2Q9Y691 235 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 CFAP20Q9Y6A4 193 aaKnown RBP14.04□□□□□ -0.16
CXCL12-208ENST00000496375 FLNCQ14315 2725 aa14.04□□□□□ -0.16
CXCL12-208ENST00000496375 PTPN13Q12923 2485 aa14.03□□□□□ -0.16
CXCL12-208ENST00000496375 MROH6A6NGR9 719 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms