RNA–Protein interactions for RNA: ENST00000496342.1

RHBDD3-207, Transcript of rhomboid domain containing 3, humanhuman

TSL 2

Gene RHBDD3, Length 849 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDD3-207ENST00000496342 C9orf72Q96LT7 481 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 PPM1MQ96MI6 270 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 FCRL3Q96P31 734 aaPredicted RBP17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 HGH1Q9BTY7 390 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 EPB41L1Q9H4G0 881 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 VPS37BQ9H9H4 285 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 MRM3Q9HC36 420 aaKnown RBP17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 AKAP7Q9P0M2 348 aaPredicted RBP17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 PCDHGA7Q9Y5G6 932 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 B3GALT1Q9Y5Z6 326 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 AHCTF1Q8WYP5 2266 aa17.13■□□□□ 0.33
RHBDD3-207ENST00000496342 FTH1P02794 183 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 OR56A5P0C7T3 313 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 MLLT3P42568 568 aaPredicted RBP17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 SH3BP2P78314 561 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 MRPS25P82663 173 aaKnown RBP17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 LYPLAL1Q5VWZ2 237 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 FBXO38Q6PIJ6 1188 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 PLXDC1Q8IUK5 500 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 VRK3Q8IV63 474 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 RBM12BQ8IXT5 1001 aaKnown RBP17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 MCUQ8NE86 351 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 FERD3LQ96RJ6 166 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 KIR3DX1Q9H7L2 352 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 CPNE5Q9HCH3 593 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 SLC39A1Q9NY26 324 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 ANAPC5Q9UJX4 755 aa17.12■□□□□ 0.33
RHBDD3-207ENST00000496342 UBA6A0AVT1 1052 aaPredicted RBP17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 SLC5A10A0PJK1 596 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 KLHL33A6NCF5 533 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 AP3B1O00203 1094 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 DNALI1O14645 258 aaPredicted RBP17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 RASSF9O75901 435 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 CCR7P32248 378 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 MAGEA3P43357 314 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 SARNPP82979 210 aaKnown RBP17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 PRKG2Q13237 762 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 KRT33BQ14525 404 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 SYTL3Q4VX76 610 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 IZUMO3Q5VZ72 239 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 KIAA0930Q6ICG6 404 aaPredicted RBP17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 CERS6Q6ZMG9 384 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 PDZD3Q86UT5 571 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 PPIL6Q8IXY8 311 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 OR5AR1Q8NGP9 310 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 SGSM3Q96HU1 749 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 PWWP2AQ96N64 755 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 XKR8Q9H6D3 395 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 SIDT1Q9NXL6 827 aaKnown RBP17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 PCYOX1Q9UHG3 505 aa17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 DSPP15924 2871 aaKnown RBP17.11■□□□□ 0.33
RHBDD3-207ENST00000496342 OR6C74A6NCV1 312 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 OR5K3A6NET4 321 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 BHMG1C9JSJ3 638 aaPredicted RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 IFRD1O00458 451 aaPredicted RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 LIN7AO14910 233 aaPredicted RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 NVLO15381 856 aaKnown RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 TTI1O43156 1089 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 EIF3BP55884 814 aaKnown RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 ANKRD20A4Q4UJ75 823 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 ZNF789Q5FWF6 425 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 AARS2Q5JTZ9 985 aaKnown RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 CTSL3PQ5NE16 218 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 CACHD1Q5VU97 1274 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 VASH2Q86V25 355 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 UNC5BQ8IZJ1 945 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 OR4E2Q8NGC2 313 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 OR52E1Q8NGJ3 308 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 SLCO2A1Q92959 643 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 FAM136AQ96C01 138 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 SIGLEC10Q96LC7 697 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 TAAR9Q96RI9 348 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 TTC1Q99614 292 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 MAP3K3Q99759 626 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 P2RY12Q9H244 342 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 XAB2Q9HCS7 855 aaKnown RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 SAMD15Q9P1V8 674 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 TSR3Q9UJK0 312 aaKnown RBP17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 PLAGL1Q9UM63 463 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 MAD1L1Q9Y6D9 718 aa17.1■□□□□ 0.33
RHBDD3-207ENST00000496342 SPTBP11277 2137 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 LAMA5O15230 3695 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 IGHV5-51A0A0C4DH38 117 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 SDR42E2A6NKP2 422 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 QSOX1O00391 747 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 PRMT5O14744 637 aaPredicted RBP17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 NDUFS3O75489 264 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 ANKRD34CP0C6C1 535 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 MLNP12872 115 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 POLR2CP19387 275 aaPredicted RBP17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 IVDP26440 423 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 ACADLP28330 430 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 TTPAP49638 278 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 CXADRP78310 365 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 DR1Q01658 176 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 HSPA14Q0VDF9 509 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 RPA4Q13156 261 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 DHX34Q14147 1143 aaKnown RBP17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 KCNAB1Q14722 419 aa17.09■□□□□ 0.33
RHBDD3-207ENST00000496342 MSS51Q4VC12 460 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms