RNA–Protein interactions for RNA: ENST00000496024.1

CALD1-223, Transcript of caldesmon 1, humanhuman

TSL 4

Gene CALD1, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-223ENST00000496024 PPANQ9NQ55 473 aaKnown RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 ZC3H7BQ9UGR2 993 aaKnown RBP9.6□□□□□ -0.87
CALD1-223ENST00000496024 GNPTGQ9UJJ9 305 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 SATB2Q9UPW6 733 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 MRFAP1Q9Y605 127 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 FAM169AQ9Y6X4 670 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 EPG5Q9HCE0 2579 aa9.6□□□□□ -0.87
CALD1-223ENST00000496024 CCDC187A0A096LP49 1063 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 IGHV5-10-1A0A0J9YXX1 117 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 A0A1W2PNU3 283 aaPredicted RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 ESYT3A0FGR9 886 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 LILRA5A6NI73 299 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 LIN7AO14910 233 aaPredicted RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 NIPSNAP2O75323 286 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 TUBB4AP04350 444 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 GSTM1P09488 218 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 HGFP14210 728 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 OGNP20774 298 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 CCR7P32248 378 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SLC1A2P43004 574 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 CARSP49589 748 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 LIMK2P53671 638 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 EPHA4P54764 986 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 PLTPP55058 493 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 MPP1Q00013 466 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 GSTM4Q03013 218 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 ZFP36L1Q07352 338 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 ABRQ12979 859 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 PRKG2Q13237 762 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 FASTKD3Q14CZ7 662 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 TRADDQ15628 312 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 TYSND1Q2T9J0 566 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SPANXN3Q5MJ09 141 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 CTSL3PQ5NE16 218 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 RNF187Q5TA31 235 aaPredicted RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 CAPRIN2Q6IMN6 1127 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 UNC5AQ6ZN44 842 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 CENPUQ71F23 418 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 RAB11FIP2Q7L804 512 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 PDZD3Q86UT5 571 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 CCDC25Q86WR0 208 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 VRK3Q8IV63 474 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SPNS2Q8IVW8 549 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SLITRK4Q8IW52 837 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 NOA1Q8NC60 698 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 FBXO36Q8NEA4 188 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 MNS1Q8NEH6 495 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 CFAP61Q8NHU2 1237 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SKA2Q8WVK7 121 aaPredicted RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 ZCCHC14Q8WYQ9 949 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 RSC1A1Q92681 617 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 TFGQ92734 400 aaPredicted RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 TGM7Q96PF1 710 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 TCF12Q99081 682 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 NRTNQ99748 197 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 WDR83Q9BRX9 315 aaKnown RBP9.59□□□□□ -0.87
CALD1-223ENST00000496024 NAT9Q9BTE0 207 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 HGH1Q9BTY7 390 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 CARD6Q9BX69 1037 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 OR52A5Q9H2C5 316 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 POLR1BQ9H9Y6 1135 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 UCK1Q9HA47 277 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SAYSD1Q9NPB0 183 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 GRHL1Q9NZI5 618 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 OGFRQ9NZT2 677 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 WHRNQ9P202 907 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SLC17A6Q9P2U8 582 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 FBXO5Q9UKT4 447 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 TEX264Q9Y6I9 313 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 COLEC10Q9Y6Z7 277 aa9.59□□□□□ -0.87
CALD1-223ENST00000496024 SLC5A10A0PJK1 596 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 CTAGE15A4D2H0 777 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 TMX2-CTNND1H3BSU7 103 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 NDC80O14777 642 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 BRINP1O60477 761 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 HAUS5O94927 633 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 TTC4O95801 387 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 S1PR4O95977 384 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 APOA4P06727 396 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 JMJD7P0C870 316 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 CTAGE8P0CG41 777 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 PKMP14618 531 aaKnown RBP9.58□□□□□ -0.88
CALD1-223ENST00000496024 CHRM3P20309 590 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 RPS3P23396 243 aaKnown RBP eCLIP9.58□□□□□ -0.88
CALD1-223ENST00000496024 AOAHP28039 575 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 CCKBRP32239 447 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 ABCG1P45844 678 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 LEPRP48357 1165 aaKnown RBP9.58□□□□□ -0.88
CALD1-223ENST00000496024 MAPK10P53779 464 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 GFERP55789 205 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 RPA4Q13156 261 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 C16orf72Q14CZ0 275 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 TMED2Q15363 201 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 IRGCQ6NXR0 463 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 TMEM71Q6P5X7 295 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 TRMT10BQ6PF06 316 aaKnown RBP9.58□□□□□ -0.88
CALD1-223ENST00000496024 CTAGE6Q86UF2 777 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 LRRC6Q86X45 466 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 CTAGE4Q8IX94 777 aa9.58□□□□□ -0.88
CALD1-223ENST00000496024 RBM12BQ8IXT5 1001 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms