RNA–Protein interactions for RNA: ENST00000495100.1

GPC1-209, Transcript of glypican 1, humanhuman

TSL 1 (best)

Gene GPC1, Length 3,525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-209ENST00000495100 DUS2Q9NX74 493 aaKnown RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 HECAQ9UBI9 543 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 CACNA1IQ9P0X4 2223 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 BPTFQ12830 3046 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 ZSCAN9O15535 394 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 UROSP10746 265 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 FDXRP22570 491 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 CTSOP43234 321 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 C21orf59P57076 290 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 IRF8Q02556 426 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 UGT3A2Q3SY77 523 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 NHSL2Q5HYW2 709 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 AARS2Q5JTZ9 985 aaKnown RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 IER5LQ5T953 404 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 COLGALT2Q8IYK4 626 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 AHI1Q8N157 1196 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 C7orf57Q8NEG2 295 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 TRPV3Q8NET8 790 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 PTCD2Q8WV60 388 aaKnown RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 NSMCE3Q96MG7 304 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 ATOH8Q96SQ7 321 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 HOPXQ9BPY8 73 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 TRIM54Q9BYV2 358 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 ATXN10Q9UBB4 475 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 VPS51Q9UID3 782 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 CLEC4EQ9ULY5 219 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 ST14Q9Y5Y6 855 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 CFAP20Q9Y6A4 193 aaKnown RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 MLYCDO95822 493 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 FSHRP23945 695 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 PTGER1P34995 402 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 MASP1P48740 699 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 SEPHS1P49903 392 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 CD300LGQ6UXG3 332 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 Q6ZVU0 165 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 UBE2R2Q712K3 238 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 DNAJB7Q7Z6W7 309 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 ADGRG6Q86SQ4 1221 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 SYT12Q8IV01 421 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 SLC47A1Q96FL8 570 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 OTUB1Q96FW1 271 aaPredicted RBP13.22□□□□□ -0.29
GPC1-209ENST00000495100 CGREF1Q99674 301 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 TBC1D23Q9NUY8 699 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 OLAHQ9NV23 265 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 NDUFA13Q9P0J0 144 aa13.22□□□□□ -0.29
GPC1-209ENST00000495100 ZNF646O15015 1829 aaPredicted RBP13.21□□□□□ -0.29
GPC1-209ENST00000495100 GLYATL1P3A0A0U1RQE8 302 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 EVPLLA8MZ36 301 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 ANXA6P08133 673 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 PREPP48147 710 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 CYHR1Q6ZMK1 362 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 ADCK1Q86TW2 530 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 OR5AK3PQ8NH89 298 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 RNF208Q9H0X6 261 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 LRTM1Q9HBL6 345 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 PTTG2Q9NZH5 202 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 TRIM17Q9Y577 477 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 M0QZQ0 153 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 RFXANKO14593 260 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 STC2O76061 302 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 SEC24AO95486 1093 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 CDK4P11802 303 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 COX7A2P14406 83 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 CLK1P49759 484 aaKnown RBP13.21□□□□□ -0.29
GPC1-209ENST00000495100 ARHGDIAP52565 204 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 ZNF135P52742 658 aaPredicted RBP13.21□□□□□ -0.29
GPC1-209ENST00000495100 YBEYP58557 167 aaPredicted RBP13.21□□□□□ -0.29
GPC1-209ENST00000495100 XIAPP98170 497 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 GPR153Q6NV75 609 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 BLOC1S3Q6QNY0 202 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 SERPINA13PQ6UXR4 307 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 VTCN1Q7Z7D3 282 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 KCNN1Q92952 543 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 TOR3AQ9H497 397 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 PRDM16Q9HAZ2 1276 aa13.21□□□□□ -0.29
GPC1-209ENST00000495100 PRUNE2Q8WUY3 3088 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 DNAH14Q0VDD8 3507 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 CCL16O15467 120 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 TPST2O60704 377 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 CLDN11O75508 207 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 RECQL5O94762 991 aaPredicted RBP13.21□□□□□ -0.3
GPC1-209ENST00000495100 ATE1O95260 518 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 C1QCP02747 245 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 GALTP07902 379 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 CHRM1P11229 460 aaPredicted RBP13.21□□□□□ -0.3
GPC1-209ENST00000495100 HOXD9P28356 352 aaPredicted RBP13.21□□□□□ -0.3
GPC1-209ENST00000495100 CRATP43155 626 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 RPL34P49207 117 aaKnown RBP13.21□□□□□ -0.3
GPC1-209ENST00000495100 RAB39AQ14964 217 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 NR1D2Q14995 579 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 R3HCC1LQ7Z5L2 792 aaKnown RBP13.21□□□□□ -0.3
GPC1-209ENST00000495100 RGL4Q8IZJ4 473 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 C8orf59Q8N0T1 100 aaPredicted RBP13.21□□□□□ -0.3
GPC1-209ENST00000495100 SLC13A3Q8WWT9 602 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 SEPT8Q92599 483 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 MAL2Q969L2 176 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 UBE2FQ969M7 185 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 PPP1R2P1Q96PQ5 205 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 INPP5KQ9BT40 448 aa13.21□□□□□ -0.3
GPC1-209ENST00000495100 C6orf62Q9GZU0 229 aaPredicted RBP13.21□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms