RNA–Protein interactions for RNA: ENST00000494956.1

NELFE-213, Transcript of negative elongation factor complex member E, humanhuman

TSL 3

Gene NELFE, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-213ENST00000494956 CFAP99D6REC4 459 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 CEP104O60308 925 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 SUN1O94901 812 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 GOT2P00505 430 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 FGGP02679 453 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 APRTP07741 180 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 NELFEP18615 380 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 CSE1LP55060 971 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 PRKG2Q13237 762 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 SEMA5AQ13591 1074 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 TRIP13Q15645 432 aaPredicted RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 GPR19Q15760 415 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 GPR33Q49SQ1 333 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 DNTTIP2Q5QJE6 756 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 TSTD2Q5T7W7 516 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 LINC00523Q86TU6 105 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 RASGRP3Q8IV61 690 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 CCDC89Q8N998 374 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 LSM14AQ8ND56 463 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 LKAAEAR1Q8TD35 194 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 LRRC45Q96CN5 670 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 ZDHHC12Q96GR4 267 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 ALS2CR12Q96Q35 445 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 RUFY1Q96T51 708 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 HGH1Q9BTY7 390 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 RAB33BQ9H082 229 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 KLHL25Q9H0H3 589 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 KIR3DX1Q9H7L2 352 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 GPN2Q9H9Y4 310 aaPredicted RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 CASS4Q9NQ75 786 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 LNPEPQ9UIQ6 1025 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 ACSL5Q9ULC5 683 aa10.34□□□□□ -0.75
NELFE-213ENST00000494956 SNRNP200O75643 2136 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 FASNP49327 2511 aaKnown RBP10.34□□□□□ -0.75
NELFE-213ENST00000494956 TCRBV7S3A2A0A539 114 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 UBA6A0AVT1 1052 aaPredicted RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 IQCF5A8MTL0 148 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 BTN3A3O00478 584 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 TOX3O15405 576 aaPredicted RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 SPAG6O75602 509 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 NTRK1P04629 796 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 PVRP15151 417 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 PSMA3P25788 255 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 SESN2P58004 480 aaPredicted RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 BASP1P80723 227 aaKnown RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 NFATC3Q12968 1075 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 TUBB3Q13509 450 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 KRT33BQ14525 404 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 CCNG2Q16589 344 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 SKIDA1Q1XH10 827 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 C16orf46Q6P387 395 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 ZNF662Q6ZS27 426 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 ZNF534Q76KX8 674 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 OOSP2Q86WS3 158 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 LMNTD1Q8N9Z9 388 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 ZSCAN1Q8NBB4 408 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 SIDT2Q8NBJ9 832 aaKnown RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 OR52E1Q8NGJ3 308 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 OR5AR1Q8NGP9 310 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 MED8Q96G25 268 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 WBP1Q96G27 269 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 SLC41A2Q96JW4 573 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 ARHGAP9Q9BRR9 750 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 CHRAC1Q9NRG0 131 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 PAK5Q9P286 719 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 MARCH4Q9P2E8 410 aaPredicted RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 CIDEBQ9UHD4 219 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 TTC7AQ9ULT0 858 aaPredicted RBP10.33□□□□□ -0.76
NELFE-213ENST00000494956 PLAGL1Q9UM63 463 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 TCAF1Q9Y4C2 921 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 RPS6KL1Q9Y6S9 549 aa10.33□□□□□ -0.76
NELFE-213ENST00000494956 C17orf113A0A1B0GUU1 675 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 HEATR9A2RTY3 570 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 GSAPA4D1B5 854 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 TLCD2A6NGC4 264 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 SLC9B1P1A6NJY1 282 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 ERI2A8K979 691 aaKnown RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 BTN3A1O00481 513 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 ZNF189O75820 626 aaPredicted RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 F7P08709 466 aaPredicted RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 FURINP09958 794 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 TPBGLP0DKB5 382 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 FGF5P12034 268 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 PLA2G2AP14555 144 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 ADRA1DP25100 572 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 MAP4P27816 1152 aaKnown RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 NMBRP28336 390 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 OAS2P29728 719 aaKnown RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 STAT5AP42229 794 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 VPS41P49754 854 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 BOP1Q14137 746 aaKnown RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 PWWP2BQ6NUJ5 590 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 FAM199XQ6PEV8 388 aaPredicted RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 CES3Q6UWW8 571 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 C6orf15Q6UXA7 325 aaPredicted RBP10.32□□□□□ -0.76
NELFE-213ENST00000494956 GSTA5Q7RTV2 222 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 TMEM135Q86UB9 458 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 VRK3Q8IV63 474 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 SPNS2Q8IVW8 549 aa10.32□□□□□ -0.76
NELFE-213ENST00000494956 KRT222Q8N1A0 295 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms