RNA–Protein interactions for RNA: ENST00000494800.1

HDAC4-211, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 451 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-211ENST00000494800 MGAT1P26572 445 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 MAGEA6P43360 314 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 LEPRP48357 1165 aaKnown RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 ARL4DP49703 201 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 GNG11P61952 73 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 CRADDP78560 199 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 VAC14Q08AM6 782 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 KCNJ11Q14654 390 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 PPP1R7Q15435 360 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 DNTTIP2Q5QJE6 756 aaKnown RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 MANEAQ5SRI9 462 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 ANKS6Q68DC2 871 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 DUS1LQ6P1R4 473 aaKnown RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 CASC4Q6P4E1 433 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 FAM92BQ6ZTR7 304 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 ZFAND4Q86XD8 727 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 MPP5Q8N3R9 675 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 LILRA3Q8N6C8 439 aaPredicted RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 BMPERQ8N8U9 685 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 UBXN4Q92575 508 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 KIFC1Q9BW19 673 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 OR52A5Q9H2C5 316 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 MVB12BQ9H7P6 319 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 XAB2Q9HCS7 855 aaKnown RBP17.21■□□□□ 0.35
HDAC4-211ENST00000494800 HRASLS2Q9NWW9 162 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 B3GALT1Q9Y5Z6 326 aa17.21■□□□□ 0.35
HDAC4-211ENST00000494800 UBA6A0AVT1 1052 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-211ENST00000494800 MAGEB16A2A368 324 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 OR5K3A6NET4 321 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 MATN2O00339 956 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 KDM1AO60341 852 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 MLNP12872 115 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 PREPP48147 710 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 SEPHS1P49903 392 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 FOXM1Q08050 763 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 BOP1Q14137 746 aaKnown RBP17.2■□□□□ 0.34
HDAC4-211ENST00000494800 ARHGAP40Q5TG30 622 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 MRNIPQ6NTE8 343 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 ZNF534Q76KX8 674 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 SDCCAG8Q86SQ7 713 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-211ENST00000494800 ZSCAN1Q8NBB4 408 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 LCN9Q8WX39 176 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 JPH3Q8WXH2 748 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-211ENST00000494800 TFGQ92734 400 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-211ENST00000494800 UBL7Q96S82 380 aaPredicted RBP17.2■□□□□ 0.34
HDAC4-211ENST00000494800 SRMSQ9H3Y6 488 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 CPNE5Q9HCH3 593 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 TREX1Q9NSU2 369 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 SYBUQ9NX95 663 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 SOX13Q9UN79 622 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 SSUH2Q9Y2M2 353 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 PRSS21Q9Y6M0 314 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 KIF26BQ2KJY2 2108 aa17.2■□□□□ 0.34
HDAC4-211ENST00000494800 OR1I1O60431 355 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 NDUFS3O75489 264 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 IL11RAQ14626 422 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 TGIF1Q15583 401 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 XKR5Q6UX68 686 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 LRRC6Q86X45 466 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 DTX1Q86Y01 620 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 KMT5CQ86Y97 462 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 CARFQ8N187 725 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 IL22RA1Q8N6P7 574 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 MCUQ8NE86 351 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 CTRCQ99895 268 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 GNPTGQ9UJJ9 305 aa17.19■□□□□ 0.34
HDAC4-211ENST00000494800 RALYQ9UKM9 306 aaKnown RBP17.19■□□□□ 0.34
HDAC4-211ENST00000494800 TCRBV7S3A2A0A539 114 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 CTAGE9A4FU28 777 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 OR6C74A6NCV1 312 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 TLCD2A6NGC4 264 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 SDR42E2A6NKP2 422 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 USP27XA6NNY8 438 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 K7ENP7 123 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 PRMT5O14744 637 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 ZNF185O15231 689 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 MAP3K7O43318 606 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 VAPBO95292 243 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 NMBRP28336 390 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 PDHA2P29803 388 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 BRD3Q15059 726 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 TMED2Q15363 201 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 ZNF658BQ4V348 819 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 RNF187Q5TA31 235 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 PTRHD1Q6GMV3 140 aaKnown RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 INO80CQ6PI98 192 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 MICALCLQ6ZW33 695 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 OR4E2Q8NGC2 313 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 GSDMBQ8TAX9 411 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 ASZ1Q8WWH4 475 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 KLHL6Q8WZ60 621 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 CPT1BQ92523 772 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 PMEPA1Q969W9 287 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 RUNDC3BQ96NL0 473 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 PANX3Q96QZ0 392 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 NAPGQ99747 312 aaPredicted RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 CARD6Q9BX69 1037 aa17.18■□□□□ 0.34
HDAC4-211ENST00000494800 TRIT1Q9H3H1 467 aaKnown RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 TFB2MQ9H5Q4 396 aaKnown RBP17.18■□□□□ 0.34
HDAC4-211ENST00000494800 POLG2Q9UHN1 485 aa17.18■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms