RNA–Protein interactions for RNA: ENST00000494646.1

MSH5-218, Transcript of mutS homolog 5, humanhuman

TSL 4

Gene MSH5, Length 528 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-218ENST00000494646 LNPEPQ9UIQ6 1025 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 CROTQ9UKG9 612 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 COLEC10Q9Y6Z7 277 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 SEC16AO15027 2179 aa9.36□□□□□ -0.91
MSH5-218ENST00000494646 OR5K3A6NET4 321 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 OR51F1A6NGY5 319 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 CFAP99D6REC4 459 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 AP2A1O95782 977 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 IFNB1P01574 187 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 SFTPCP11686 197 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 ACRV1P26436 265 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 CDC25BP30305 580 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 STAT5AP42229 794 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 CCR10P46092 362 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 LMAN1P49257 510 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 POLE2P56282 527 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 FOXK1P85037 733 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 PRKG2Q13237 762 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 BRD3Q15059 726 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 GPR19Q15760 415 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 KCTD19Q17RG1 926 aaPredicted RBP9.35□□□□□ -0.91
MSH5-218ENST00000494646 GPR33Q49SQ1 333 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 DNTTIP2Q5QJE6 756 aaKnown RBP9.35□□□□□ -0.91
MSH5-218ENST00000494646 SEL1L2Q5TEA6 688 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 PWWP2BQ6NUJ5 590 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 ARMC6Q6NXE6 501 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 OOSP2Q86WS3 158 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 KLHDC8BQ8IXV7 354 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 PIANPQ8IYJ0 282 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 RNF10Q8N5U6 811 aaKnown RBP9.35□□□□□ -0.91
MSH5-218ENST00000494646 DNAAF3Q8N9W5 541 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 STYXQ8WUJ0 223 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 ZFPM2Q8WW38 1151 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 STARD8Q92502 1023 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 UBXN4Q92575 508 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 SLC41A2Q96JW4 573 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 EFHD1Q9BUP0 239 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 SLC25A18Q9H1K4 315 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 COG4Q9H9E3 785 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 ETNK1Q9HBU6 452 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 PDE7BQ9NP56 450 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 ZNF71Q9NQZ8 489 aaPredicted RBP9.35□□□□□ -0.91
MSH5-218ENST00000494646 GEMIN8Q9NWZ8 242 aaKnown RBP9.35□□□□□ -0.91
MSH5-218ENST00000494646 SEMA5BQ9P283 1151 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 RARRES3Q9UL19 164 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 PADI1Q9ULC6 663 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 ZNF148Q9UQR1 794 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 PRSS21Q9Y6M0 314 aa9.35□□□□□ -0.91
MSH5-218ENST00000494646 SNRNP200O75643 2136 aaKnown RBP9.35□□□□□ -0.91
MSH5-218ENST00000494646 TNRC6AQ8NDV7 1962 aaKnown RBP9.34□□□□□ -0.91
MSH5-218ENST00000494646 TRBV5-4A0A0C4DH59 114 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 C17orf113A0A1B0GUU1 675 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 CCDC162PA2VCL2 907 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 GSAPA4D1B5 854 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 SLC9B1P1A6NJY1 282 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 H7C0S8 307 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 BTN3A3O00478 584 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 LIASO43766 372 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 FURINP09958 794 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 CDH3P22223 829 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 MSNP26038 577 aaKnown RBP9.34□□□□□ -0.91
MSH5-218ENST00000494646 STIP1P31948 543 aaKnown RBP9.34□□□□□ -0.91
MSH5-218ENST00000494646 GRIA1P42261 906 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 PREPP48147 710 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 PRLHRP49683 370 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 KPNA2P52292 529 aaKnown RBP9.34□□□□□ -0.91
MSH5-218ENST00000494646 ACY1Q03154 408 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 CACNG1Q06432 222 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 CDC20Q12834 499 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 PRKAA1Q13131 559 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 KCNAB2Q13303 367 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 TUBB3Q13509 450 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 MAP7Q14244 749 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 DBN1Q16643 649 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 SKIDA1Q1XH10 827 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 P3H1Q32P28 736 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.34□□□□□ -0.91
MSH5-218ENST00000494646 COLEC12Q5KU26 742 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 PPP1R21Q6ZMI0 780 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 TMEM135Q86UB9 458 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 SLC13A5Q86YT5 568 aaPredicted RBP9.34□□□□□ -0.91
MSH5-218ENST00000494646 HM13Q8TCT9 377 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 HEXDCQ8WVB3 486 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 LCN9Q8WX39 176 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 CATSPER2Q96P56 530 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 RUFY1Q96T51 708 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 KLHL25Q9H0H3 589 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 OR52A5Q9H2C5 316 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 XKR8Q9H6D3 395 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 KIR3DX1Q9H7L2 352 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 LHX9Q9NQ69 397 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 FGF21Q9NSA1 209 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 KCND1Q9NSA2 647 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 SOHLH2Q9NX45 425 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 SLC2A6Q9UGQ3 507 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 PCDHB3Q9Y5E6 796 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 HEBP2Q9Y5Z4 205 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 MED13Q9UHV7 2174 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 PCM1Q15154 2024 aa9.34□□□□□ -0.91
MSH5-218ENST00000494646 IGLV3-16A0A075B6K0 115 aa9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms