RNA–Protein interactions for RNA: ENST00000494612.1

SMC4-224, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-224ENST00000494612 SECTM1Q8WVN6 248 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 SORCS1Q8WY21 1168 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 VPS33AQ96AX1 596 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 LINC00615Q96LM1 132 aaPredicted RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 AP1M1Q9BXS5 423 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 MRPL1Q9BYD6 325 aaKnown RBP4.24□□□□□ -1.73
SMC4-224ENST00000494612 FAM129AQ9BZQ8 928 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 OLAHQ9NV23 265 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 C5AR2Q9P296 337 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 GIMAP2Q9UG22 337 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 ANAPC2Q9UJX6 822 aa4.24□□□□□ -1.73
SMC4-224ENST00000494612 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP4.24□□□□□ -1.733e-11■■□□□ 12.4
SMC4-224ENST00000494612 TRBC2A0A5B9 178 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 C5orf60A6NFR6 353 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 DKC1O60832 514 aaKnown RBP eCLIP4.23□□□□□ -1.73
SMC4-224ENST00000494612 TFAP2AP05549 437 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 MYBL1P10243 752 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 ACP2P11117 423 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 PFKFB1P16118 471 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 CBLP22681 906 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 AZGP1P25311 298 aaKnown RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 USP8P40818 1118 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 CCR3P51677 355 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 GAS1P54826 345 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 TPD52P55327 224 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 ALCAMQ13740 583 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 KYNUQ16719 465 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 CBWD6Q4V339 395 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 CBWD3Q5JTY5 395 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 GCNT6Q5T4J0 391 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 RNASEH2BQ5TBB1 312 aaKnown RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 NDUFAF5Q5TEU4 345 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 PLXDC2Q6UX71 529 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 ZNF704Q6ZNC4 412 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 FAM47EQ6ZV65 393 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 KCTD8Q6ZWB6 473 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 TUBA1AQ71U36 451 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 PTOV1Q86YD1 416 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 KBTBD3Q8NAB2 608 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 POC1AQ8NBT0 407 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 Q8NFD4 153 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 OR13A1Q8NGR1 328 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 MRPS27Q92552 414 aaKnown RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 DAZLQ92904 295 aaKnown RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 CD101Q93033 1021 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 SPACA9Q96E40 222 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 BAG1Q99933 345 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 TUBA1CQ9BQE3 449 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 NEURL2Q9BR09 285 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 OR10A4Q9H209 315 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 DPAGT1Q9H3H5 408 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 RABEP2Q9H5N1 569 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 CNOT10Q9H9A5 744 aaKnown RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 HHATLQ9HCP6 504 aa4.23□□□□□ -1.73
SMC4-224ENST00000494612 CFDP1Q9UEE9 299 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 ZHX1Q9UKY1 873 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 TRIP12Q14669 1992 aaPredicted RBP4.23□□□□□ -1.73
SMC4-224ENST00000494612 TOPBP1Q92547 1522 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 ASPDHA6ND91 283 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 TBX10O75333 385 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 CKMT2P17540 419 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 GM2AP17900 193 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 FMO5P49326 533 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 CSE1LP55060 971 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 EEF1A1P68104 462 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 RALGDSQ12967 914 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 RAB6CQ53S08 254 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 EEF1A1P5Q5VTE0 462 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 SPSB3Q6PJ21 355 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 PLEKHM3Q6ZWE6 761 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 KRT74Q7RTS7 529 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 PIWIL4Q7Z3Z4 852 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 IQCHQ86VS3 1027 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 CRYBG2Q8N1P7 616 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 MUC20Q8N307 709 aaPredicted RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 TDRD5Q8NAT2 981 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 OR5M8Q8NGP6 311 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 SMPDL3BQ92485 455 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 SLC22A12Q96S37 553 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 SLX1AQ9BQ83 275 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 TRAF4Q9BUZ4 470 aaPredicted RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 RAB6CQ9H0N0 254 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 ST6GALNAC4Q9H4F1 302 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 DDX31Q9H8H2 851 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 ZCCHC17Q9NP64 241 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 FAF1Q9UNN5 650 aaPredicted RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 DLGAP4Q9Y2H0 992 aa4.22□□□□□ -1.73
SMC4-224ENST00000494612 WBP11Q9Y2W2 641 aaKnown RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 SPIN1Q9Y657 262 aaPredicted RBP4.22□□□□□ -1.73
SMC4-224ENST00000494612 TOP2AP11388 1531 aaKnown RBP4.21□□□□□ -1.73
SMC4-224ENST00000494612 TEX13DA0A0J9YY54 714 aaPredicted RBP4.21□□□□□ -1.74
SMC4-224ENST00000494612 EDDM13A0A1B0GTR0 161 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 ANKUB1A6NFN9 424 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 ANKRD66B4E2M5 251 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 CSPG5O95196 566 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 IRX6P78412 446 aaPredicted RBP4.21□□□□□ -1.74
SMC4-224ENST00000494612 MBTD1Q05BQ5 628 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 SIRPB2Q5JXA9 342 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 KLC3Q6P597 504 aa4.21□□□□□ -1.74
SMC4-224ENST00000494612 SHQ1Q6PI26 577 aaKnown RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms